CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 2
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, secretory
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	94.78	94.96
CDY26806	Canola	cytosol, mitochondrion, peroxisome	21.08	85.83
CDX74655	Canola	peroxisome, plastid	26.69	80.23
CDY30367	Canola	mitochondrion	51.26	77.26
CDY07845	Canola	plastid	51.06	76.74
PGSC0003DMT400048037	Potato	cytosol	48.55	76.52
CDY72417	Canola	cytosol	11.22	76.32
CDY22142	Canola	cytosol	11.22	76.32
Solyc03g032000.2.1	Tomato	cytosol, extracellular	48.16	75.91
CDY66403	Canola	cytosol, nucleus, peroxisome, plastid	43.33	75.17
CDX72537	Canola	mitochondrion	51.84	74.44
CDY40633	Canola	mitochondrion	52.22	74.18
CDY41653	Canola	mitochondrion	53.38	73.8
CDY24812	Canola	mitochondrion	52.8	73.19
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	46.03	71.69
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	46.03	71.69
TraesCS6B01G306300.1	Wheat	cytosol	45.84	71.39
EES07372	Sorghum	cytosol, mitochondrion	45.65	71.3
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	45.65	71.3
Os02t0713400-01	Rice	extracellular, plasma membrane	45.45	71.0
CDY05719	Canola	cytosol	24.37	70.39
PGSC0003DMT400035477	Potato	mitochondrion	49.9	70.3
Solyc02g082250.2.1	Tomato	mitochondrion	49.71	70.03
KRH76499	Soybean	nucleus	49.32	68.92
KRH28954	Soybean	nucleus	49.13	68.28
Zm00001d017823_P001	Maize	cytosol	45.65	67.05
EES09948	Sorghum	mitochondrion	42.94	65.49
TraesCS7B01G194200.1	Wheat	golgi	46.23	64.77
TraesCS7D01G229100.1	Wheat	mitochondrion	45.84	64.23
TraesCS7A01G225400.2	Wheat	mitochondrion	46.03	64.15
Zm00001d037429_P001	Maize	mitochondrion	45.65	63.78
EER89710	Sorghum	mitochondrion	45.65	63.61
CDY58054	Canola	cytosol	13.15	63.55
CDY26807	Canola	cytosol, mitochondrion	80.85	63.24
Zm00001d053118_P001	Maize	cytosol	42.36	62.75
KRH07823	Soybean	mitochondrion	47.2	61.93
HORVU7Hr1G046890.1	Barley	plastid	45.84	61.08
GSMUA_Achr9P27590_001	Banana	mitochondrion	41.78	61.02
CDX74431	Canola	cytosol	16.44	57.82
CDY13332	Canola	plastid	27.47	52.01
CDY26805	Canola	vacuole	14.7	50.0
CDY70273	Canola	cytosol, peroxisome	12.19	49.22
CDY35405	Canola	plastid	34.82	35.23
CDY22534	Canola	plastid	34.82	35.23
CDX79923	Canola	mitochondrion, plastid	34.82	33.71
CDY23835	Canola	plastid	34.82	33.15
Os04t0524136-00	Rice	plastid	11.41	29.65

Protein Annotations

KEGG:00240+1.8.1.9	KEGG:00450+1.8.1.9	MapMan:10.5.2	Gene3D:3.50.50.60	GO:A0A078GXY2	UniProt:A0A078GXY2
EnsemblPlants:CDY30366	ProteinID:CDY30366	ProteinID:CDY30366.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019430
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00045054001	InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469
ScanProsite:PS00573	PANTHER:PTHR42863	PANTHER:PTHR42863:SF9	InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905
TIGRFAMs:TIGR01292	InterPro:Thioredox_Rdtase	UniParc:UPI0004EDDE76	SEG:seg	:	:

Description

BnaA09g09110DThioredoxin reductase [Source:UniProtKB/TrEMBL;Acc:A0A078GXY2]

Coordinates

chrLK032252:-:484294..487051

Molecular Weight (calculated)

55404.5 Da

IEP (calculated)

7.883

GRAVY (calculated)

-0.308

Length

517 amino acids

Sequence
(BLAST)

001: METHKTKVCI VGSGPAAHTA AIYAARAELA PLLFEGWMAN DIAPGGQLTT TTDVENFPGF PDGILGIDLV AKLRKQSERF GAKIFTETVN KVDFSSKPFK
101: LFTNTRTVLA EAVIVSTGAV AKRLSFPGSG EGAGGFWNRG ISACAVCDGA APIFRDKPLV VIGGGDSAME EANFLTRYGS KVYIIHRRDK FRASKIMQKR
201: ALSNPKIEVI LNGSVVEAYG DESGKGVLGG LKVKNVVNGA VSDLKASGLF FAIGHEPATK FLDGQVELDE DGYVVTKPGT TKTSVAGVFA AGDVQDKKYR
301: QAVTAAGTGC MAALDAEHYL QEIGSQEVEL GQVVRATPLT VYNEVSRSTP VTVYNEVSTS TPLTVYNGAS TSTPFTVNNG ESTVRSYISK CSKSNGSSKR
401: AKLDEGGTFS SSSNTKSNVE EQAMAHPIGV KSSKGEGENL VTKATNEENN VATKTTNDER ESNSRSRLEN LWALNERDIA ERNKLSRIEL LRSLLGKTEK
501: LSEKEETLKN KLIDEML

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.