Factsheet for TraesCS6B01G306300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	99.1	99.1
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	98.49	98.49
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	96.69	96.98
EES07372	Sorghum	cytosol, mitochondrion	90.96	91.24
Os02t0713400-01	Rice	extracellular, plasma membrane	89.76	90.03
Zm00001d017823_P001	Maize	cytosol	90.06	84.94
CDY26806	Canola	cytosol, mitochondrion, peroxisome	30.42	79.53
TraesCS7B01G194200.1	Wheat	golgi	87.35	78.59
EES09948	Sorghum	mitochondrion	80.12	78.47
Solyc03g032000.2.1	Tomato	cytosol, extracellular	77.41	78.35
PGSC0003DMT400048037	Potato	cytosol	77.41	78.35
Zm00001d053118_P001	Maize	cytosol	79.52	75.64
Bra017711.1-P	Field mustard	cytosol	68.37	72.76
GSMUA_Achr9P27590_001	Banana	mitochondrion	77.11	72.32
PGSC0003DMT400035477	Potato	mitochondrion	78.92	71.39
Solyc02g082250.2.1	Tomato	mitochondrion	78.31	70.84
CDY22142	Canola	cytosol	15.66	68.42
CDY72417	Canola	cytosol	15.66	68.42
KRH76499	Soybean	nucleus	75.9	68.11
CDY40633	Canola	mitochondrion	73.8	67.31
CDX72537	Canola	mitochondrion	72.89	67.22
VIT_04s0044g01750.t01	Wine grape	mitochondrion	75.9	67.2
Bra037274.1-P	Field mustard	mitochondrion	67.47	67.07
KRH28954	Soybean	nucleus	75.0	66.94
AT4G35460.1	Thale cress	mitochondrion, plastid	75.6	66.93
CDX74655	Canola	peroxisome, plastid	34.64	66.86
CDY41653	Canola	mitochondrion	74.7	66.31
CDY24812	Canola	mitochondrion	74.4	66.22
AT2G17420.1	Thale cress	mitochondrion, plastid	76.2	66.06
Bra024516.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	57.83	65.75
CDY66403	Canola	cytosol, nucleus, peroxisome, plastid	58.73	65.44
Bra010533.1-P	Field mustard	mitochondrion	69.28	65.34
CDY07845	Canola	plastid	67.17	64.83
CDY30367	Canola	mitochondrion	66.57	64.43
Bra025646.1-P	Field mustard	cytosol	14.76	62.82
VIT_05s0049g00110.t01	Wine grape	cytosol	19.88	62.26
KRH07823	Soybean	mitochondrion	73.8	62.18
CDY05719	Canola	cytosol	31.33	58.1
CDY58054	Canola	cytosol	18.67	57.94
Bra031685.1-P	Field mustard	cytosol	18.37	57.01
CDX74431	Canola	cytosol	21.99	49.66
CDY30366	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	71.39	45.84
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	71.08	45.74
CDY70273	Canola	cytosol, peroxisome	17.17	44.53
CDY26805	Canola	vacuole	19.88	43.42
CDY13332	Canola	plastid	35.24	42.86
CDY26807	Canola	cytosol, mitochondrion	73.19	36.76
TraesCS2B01G154700.1	Wheat	plastid	48.19	30.77
Bra025645.1-P	Field mustard	cytosol	19.88	29.6

Protein Annotations

KEGG:00450+1.8.1.9	MapMan:10.5.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019430
GO:GO:0055114	InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469	ScanProsite:PS00573
PANTHER:PTHR42863	PANTHER:PTHR42863:SF9	InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	TIGRFAMs:TIGR01292
InterPro:Thioredox_Rdtase	EnsemblPlantsGene:TraesCS6B01G306300	EnsemblPlants:TraesCS6B01G306300.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6B:-:549622612..549625273

Molecular Weight (calculated)

34905.4 Da

IEP (calculated)

6.163

GRAVY (calculated)

-0.017

Length

332 amino acids

Sequence
(BLAST)

001: MEGSAVPAPL RTRVCIIGSG PAAHTAAIYA ARAELKPVLF EGWMANDIAA GGQLTTTTDV ENFPGFPTGI MGIDLMDNCR AQSARFGTNI LSETVTEVDF
101: SARPFRVTSD STTVLADTVV VATGAVARRL HFPGSDTYWN RGISACAVCD GAAPIFRNKP IAVIGGGDSA MEEGNFLTKY GSQVYIIHRR NTFRASKIMQ
201: ARALSNPKIQ VVWDSEVVEA YGGAGGGPLA GVKVKNLVTG QVSDLQVSGL FFAIGHEPAT KFLNGQLELH ADGYVATKPG STHTSVEGVF AAGDVQDKKY
301: RQAITAAGSG CMAALDAEHY LQEVGAQEGK SD

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.