Factsheet for Bra024516.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus, cytosol

Predictor Summary:

plastid 2
peroxisome 3
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66403	Canola	cytosol, nucleus, peroxisome, plastid	88.7	86.91
Bra025646.1-P	Field mustard	cytosol	21.23	79.49
Bra031685.1-P	Field mustard	cytosol	23.63	64.49
Bra017711.1-P	Field mustard	cytosol	68.49	64.1
PGSC0003DMT400048037	Potato	cytosol	71.92	64.02
Bra037274.1-P	Field mustard	mitochondrion	72.95	63.77
Solyc03g032000.2.1	Tomato	cytosol, extracellular	71.23	63.41
Os02t0713400-01	Rice	extracellular, plasma membrane	67.12	59.21
Bra010533.1-P	Field mustard	mitochondrion	70.21	58.24
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	66.1	58.13
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	66.1	58.13
EES07372	Sorghum	cytosol, mitochondrion	65.75	58.01
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	65.75	58.01
TraesCS6B01G306300.1	Wheat	cytosol	65.75	57.83
PGSC0003DMT400035477	Potato	mitochondrion	72.6	57.77
Solyc02g082250.2.1	Tomato	mitochondrion	72.26	57.49
KRH76499	Soybean	nucleus	70.89	55.95
KRH28954	Soybean	nucleus	70.89	55.65
Zm00001d017823_P001	Maize	cytosol	65.75	54.55
EES09948	Sorghum	mitochondrion	61.64	53.1
TraesCS7B01G194200.1	Wheat	golgi	66.78	52.85
EER89710	Sorghum	mitochondrion	67.12	52.83
Zm00001d037429_P001	Maize	mitochondrion	66.44	52.43
TraesCS7D01G229100.1	Wheat	mitochondrion	65.75	52.03
TraesCS7A01G225400.2	Wheat	mitochondrion	66.1	52.02
Zm00001d053118_P001	Maize	cytosol	60.27	50.43
KRH07823	Soybean	mitochondrion	66.78	49.49
HORVU7Hr1G046890.1	Barley	plastid	65.75	49.48
GSMUA_Achr9P27590_001	Banana	mitochondrion	59.25	48.87
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	78.08	44.19
Bra000234.1-P	Field mustard	plastid	42.12	24.07
Bra004639.1-P	Field mustard	plastid	42.47	23.8
Bra025645.1-P	Field mustard	cytosol	15.07	19.73
Os04t0524136-00	Rice	plastid	6.85	10.05

Protein Annotations

MapMan:10.5.2	Gene3D:3.50.50.60	EnsemblPlantsGene:Bra024516	EnsemblPlants:Bra024516.1	EnsemblPlants:Bra024516.1-P	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:IPR036188	UniProt:M4E6W1	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469
ScanProsite:PS00573	PANTHER:PTHR42863	PANTHER:PTHR42863:SF9	InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905
UniParc:UPI000253F015	SEG:seg	:	:	:	:

Description

AT2G17420 (E=7e-117) NTRA, ATNTRA, NTR2 | NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A); thioredoxin-disulfide reductase

Coordinates

chrA06:-:16353567..16355398

Molecular Weight (calculated)

31609.7 Da

IEP (calculated)

9.172

GRAVY (calculated)

-0.269

Length

292 amino acids

Sequence
(BLAST)

001: MDGQRHRSRR PANDHHRRRE LPRLPRRHPR SERFGTKIFT ETVTKVDFSS KPFKLFTDSR TVLADAVIIS TGAVAKQLSF AGSGEGAGGF WNRGISACAV
101: CDGAAPIFRN KPLVVIGGGD SAMEEANFLT KYGSKVYIIH RRDTFRASKI MQQRALSNPK IEVIWNSSVV EAYGDEDGKG VLGGLKVKNV VTGDVSDLKV
201: CGLFFAIGHE PATKFLDGQL ELDEDGYVVT KPGTTKTSVV GVFAAGDVQD KKYRQAITAA GTGCMAALDA EHYLQEIGSQ EVGVESGLCA KL

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.