CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 3
mitochondrion 7
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	cytosol, mitochondrion, nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037429_P001	Maize	mitochondrion	94.61	94.86
EES07372	Sorghum	cytosol, mitochondrion	79.51	89.12
TraesCS7B01G194200.1	Wheat	golgi	87.87	88.35
TraesCS7A01G225400.2	Wheat	mitochondrion	87.87	87.87
TraesCS7D01G229100.1	Wheat	mitochondrion	87.33	87.8
HORVU7Hr1G046890.1	Barley	plastid	87.87	84.02
CDY26806	Canola	cytosol, mitochondrion, peroxisome	27.49	80.31
PGSC0003DMT400048037	Potato	cytosol	68.73	77.74
GSMUA_Achr9P27590_001	Banana	mitochondrion	74.12	77.68
EES09948	Sorghum	mitochondrion	70.89	77.58
Solyc03g032000.2.1	Tomato	cytosol, extracellular	68.46	77.44
Bra017711.1-P	Field mustard	cytosol	62.53	74.36
PGSC0003DMT400035477	Potato	mitochondrion	73.05	73.84
Solyc02g082250.2.1	Tomato	mitochondrion	72.24	73.02
VIT_04s0044g01750.t01	Wine grape	mitochondrion	72.24	71.47
KRH76499	Soybean	nucleus	70.89	71.08
AT4G35460.1	Thale cress	mitochondrion, plastid	71.16	70.4
KRH28954	Soybean	nucleus	70.08	69.89
CDY22142	Canola	cytosol	14.29	69.74
CDY72417	Canola	cytosol	14.29	69.74
CDY40633	Canola	mitochondrion	67.92	69.23
CDX72537	Canola	mitochondrion	66.85	68.89
Bra037274.1-P	Field mustard	mitochondrion	61.99	68.86
CDY41653	Canola	mitochondrion	69.27	68.72
CDY24812	Canola	mitochondrion	69.0	68.63
Bra010533.1-P	Field mustard	mitochondrion	64.96	68.47
CDX74655	Canola	peroxisome, plastid	31.27	67.44
CDY07845	Canola	plastid	62.26	67.15
Bra024516.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	52.83	67.12
CDY66403	Canola	cytosol, nucleus, peroxisome, plastid	53.91	67.11
CDY30367	Canola	mitochondrion	61.19	66.18
AT2G17420.1	Thale cress	mitochondrion, plastid	68.19	66.06
Bra025646.1-P	Field mustard	cytosol	13.75	65.38
KRH07823	Soybean	mitochondrion	67.92	63.96
VIT_05s0049g00110.t01	Wine grape	cytosol	17.52	61.32
CDY58054	Canola	cytosol	17.25	59.81
Bra031685.1-P	Field mustard	cytosol	16.98	58.88
CDY05719	Canola	cytosol	28.3	58.66
CDX74431	Canola	cytosol	20.22	51.02
CDY26805	Canola	vacuole	19.14	46.71
CDY30366	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	63.61	45.65
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	63.34	45.54
CDY13332	Canola	plastid	32.08	43.59
CDY70273	Canola	cytosol, peroxisome	14.82	42.97
CDY26807	Canola	cytosol, mitochondrion	65.77	36.91
KXG36845	Sorghum	plastid	46.9	33.21
Bra025645.1-P	Field mustard	cytosol	16.71	27.8

Protein Annotations

KEGG:00450+1.8.1.9	MapMan:10.5.2	Gene3D:3.50.50.60	EntrezGene:8078272	UniProt:C5Z291	EnsemblPlants:EER89710
ProteinID:EER89710	ProteinID:EER89710.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019430	GO:GO:0055114
InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469	ScanProsite:PS00573	PANTHER:PTHR42863
PANTHER:PTHR42863:SF9	InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	EnsemblPlantsGene:SORBI_3010G135000	SUPFAM:SSF51905	SignalP:SignalP-noTM
TIGRFAMs:TIGR01292	InterPro:Thioredox_Rdtase	UniParc:UPI0001A895FA	RefSeq:XP_002438343.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:20021054..20024137

Molecular Weight (calculated)

38544.8 Da

IEP (calculated)

7.152

GRAVY (calculated)

0.078

Length

371 amino acids

Sequence
(BLAST)

001: MSLCSKLLAL LRKSRALTTT STAAAAAATA SATASANGME EAVAAAGPLR TRVCIIGSGP AAHTAAVYAA RAELKPVLFE GWLANDIAAG GQLTTTTDVE
101: NFPGFPDGVL GAELMDRCRA QSLRFGTKIL TETVTSVDFS ARPFRVASDD TVVHADSVVV ATGAVARRLH FAGSDAFWNR GISACAVCDG AAPIFRNKPI
201: AVIGGGDSAM EEANFLTKYG SQVYIIHRRN AFRASKIMQA RALSNPKIKV VWDSEVVEAY GGGEGGPLAG VKVKNVVTGE VSDLQVAGLF FAIGHEPATK
301: FLGGQLELDS DGYVVTKPGS THTSVKGVFA AGDVQDKKYR QAITAAGSGC MAALDAEHYL QEVGAQEGKT D

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.