Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26806 | Canola | cytosol, mitochondrion, peroxisome | 40.7 | 55.12 |
| CDY05719 | Canola | cytosol | 55.81 | 53.63 |
| CDY72417 | Canola | cytosol | 23.26 | 52.63 |
| CDY22142 | Canola | cytosol | 23.26 | 52.63 |
| CDY13332 | Canola | plastid | 83.14 | 52.38 |
| CDY58054 | Canola | cytosol | 30.23 | 48.6 |
| CDY66403 | Canola | cytosol, nucleus, peroxisome, plastid | 80.81 | 46.64 |
| CDX74431 | Canola | cytosol | 36.05 | 42.18 |
| PGSC0003DMT400048037 | Potato | cytosol | 72.09 | 37.8 |
| Solyc03g032000.2.1 | Tomato | cytosol, extracellular | 71.51 | 37.5 |
| TraesCS6A01G278000.1 | Wheat | cytosol, mitochondrion | 67.44 | 34.94 |
| TraesCS6D01G258600.1 | Wheat | extracellular, golgi, unclear | 67.44 | 34.94 |
| Os02t0713400-01 | Rice | extracellular, plasma membrane | 66.86 | 34.74 |
| HORVU6Hr1G070120.1 | Barley | cytosol, mitochondrion | 66.86 | 34.74 |
| TraesCS6B01G306300.1 | Wheat | cytosol | 66.86 | 34.64 |
| PGSC0003DMT400035477 | Potato | mitochondrion | 73.26 | 34.33 |
| CDY41653 | Canola | mitochondrion | 74.42 | 34.22 |
| Solyc02g082250.2.1 | Tomato | mitochondrion | 72.67 | 34.06 |
| CDY40633 | Canola | mitochondrion | 70.93 | 33.52 |
| CDY24812 | Canola | mitochondrion | 72.67 | 33.51 |
| EES07372 | Sorghum | cytosol, mitochondrion | 63.95 | 33.23 |
| CDX72537 | Canola | mitochondrion | 69.19 | 33.06 |
| CDY30367 | Canola | mitochondrion | 65.7 | 32.94 |
| KRH76499 | Soybean | nucleus | 70.35 | 32.7 |
| CDY07845 | Canola | plastid | 65.12 | 32.56 |
| KRH28954 | Soybean | nucleus | 70.35 | 32.53 |
| Zm00001d017823_P001 | Maize | cytosol | 65.7 | 32.1 |
| EER89710 | Sorghum | mitochondrion | 67.44 | 31.27 |
| TraesCS7B01G194200.1 | Wheat | golgi | 66.28 | 30.89 |
| Zm00001d037429_P001 | Maize | mitochondrion | 66.28 | 30.81 |
| TraesCS7A01G225400.2 | Wheat | mitochondrion | 66.28 | 30.73 |
| EES09948 | Sorghum | mitochondrion | 60.47 | 30.68 |
| TraesCS7D01G229100.1 | Wheat | mitochondrion | 65.7 | 30.62 |
| KRH07823 | Soybean | mitochondrion | 69.77 | 30.46 |
| HORVU7Hr1G046890.1 | Barley | plastid | 65.7 | 29.12 |
| Zm00001d053118_P001 | Maize | cytosol | 56.98 | 28.08 |
| GSMUA_Achr9P27590_001 | Banana | mitochondrion | 57.56 | 27.97 |
| CDY30366 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 80.23 | 26.69 |
| CDY26807 | Canola | cytosol, mitochondrion | 82.56 | 21.48 |
| CDY22534 | Canola | plastid | 41.28 | 13.89 |
| CDY35405 | Canola | plastid | 41.28 | 13.89 |
| CDX79923 | Canola | mitochondrion, plastid | 40.7 | 13.11 |
| CDY23835 | Canola | plastid | 40.7 | 12.89 |
| CDY26805 | Canola | vacuole | 5.23 | 5.92 |
| CDY70273 | Canola | cytosol, peroxisome | 1.16 | 1.56 |
| Os04t0524136-00 | Rice | plastid | 1.74 | 1.51 |
Protein Annotations
| MapMan:10.5.2 | Gene3D:3.50.50.60 | GO:A0A078CCY9 | EnsemblPlants:CDX74655 | ProteinID:CDX74655 | ProteinID:CDX74655.1 |
| InterPro:FAD/NAD-bd_sf | InterPro:FAD/NAD-binding_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00116605001 | InterPro:IPR036188 | PFAM:PF07992 | PRINTS:PR00368 |
| PRINTS:PR00469 | ScanProsite:PS00573 | PANTHER:PTHR42863 | PANTHER:PTHR42863:SF9 | InterPro:Pyr_nucl-diS_OxRdtase_2_AS | InterPro:Pyridine_nuc-diS_OxRdtase_2 |
| SUPFAM:SSF51905 | UniParc:UPI0004EDC20F | SEG:seg | : | : | : |
Description
BnaA05g04010D
Coordinates
chrLK031802:+:200..1008
Molecular Weight (calculated)
18259.0 Da
IEP (calculated)
5.251
GRAVY (calculated)
0.092
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: LCSPMPSSSP PELSFVGSGE GAGGFWNRGI SACAVCDGAA LIFKNKPLVV IGGGDSAMEK VYIIHRCDTF RASKIMQQRA LSKPKIELIW NSVVEAYGDE
101: NGKGVLGGLK VKNVIVSGDV SDLKISGLFF AIGHEPATKF LDGQLELDED GYVVTKPGTT KTSVLLYEAV DF
101: NGKGVLGGLK VKNVIVSGDV SDLKISGLFF AIGHEPATKF LDGQLELDED GYVVTKPGTT KTSVLLYEAV DF
001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD
Arabidopsis Description
NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.