CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053118_P001	Maize	cytosol	89.68	87.11
EES07372	Sorghum	cytosol, mitochondrion	80.24	82.18
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	78.47	80.12
TraesCS6B01G306300.1	Wheat	cytosol	78.47	80.12
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	78.47	80.12
Os02t0713400-01	Rice	extracellular, plasma membrane	78.17	80.06
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	76.99	78.85
PGSC0003DMT400048037	Potato	cytosol	70.5	72.87
Solyc03g032000.2.1	Tomato	cytosol, extracellular	69.91	72.26
EER89710	Sorghum	mitochondrion	77.58	70.89
CDY26806	Canola	cytosol, mitochondrion, peroxisome	26.25	70.08
Bra017711.1-P	Field mustard	cytosol	63.42	68.91
GSMUA_Achr9P27590_001	Banana	mitochondrion	70.21	67.23
PGSC0003DMT400035477	Potato	mitochondrion	72.27	66.76
Solyc02g082250.2.1	Tomato	mitochondrion	71.98	66.48
KRH76499	Soybean	nucleus	70.8	64.86
VIT_04s0044g01750.t01	Wine grape	mitochondrion	71.39	64.53
CDY22142	Canola	cytosol	14.45	64.47
CDY72417	Canola	cytosol	14.45	64.47
KRH28954	Soybean	nucleus	70.21	63.98
CDY40633	Canola	mitochondrion	67.85	63.19
CDX72537	Canola	mitochondrion	66.96	63.06
AT4G35460.1	Thale cress	mitochondrion, plastid	68.73	62.13
CDY66403	Canola	cytosol, nucleus, peroxisome, plastid	54.57	62.08
CDY41653	Canola	mitochondrion	68.14	61.76
CDY24812	Canola	mitochondrion	67.85	61.66
Bra010533.1-P	Field mustard	mitochondrion	64.01	61.65
Bra024516.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	53.1	61.64
Bra037274.1-P	Field mustard	mitochondrion	60.47	61.38
AT2G17420.1	Thale cress	mitochondrion, plastid	68.73	60.84
CDX74655	Canola	peroxisome, plastid	30.68	60.47
CDY07845	Canola	plastid	60.77	59.88
KRH07823	Soybean	mitochondrion	69.32	59.64
CDY30367	Canola	mitochondrion	60.18	59.48
VIT_05s0049g00110.t01	Wine grape	cytosol	18.29	58.49
CDY05719	Canola	cytosol	29.2	55.31
Bra025646.1-P	Field mustard	cytosol	12.68	55.13
CDY58054	Canola	cytosol	16.81	53.27
Bra031685.1-P	Field mustard	cytosol	16.52	52.34
CDX74431	Canola	cytosol	19.47	44.9
CDY30366	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	65.49	42.94
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	65.19	42.83
CDY13332	Canola	plastid	32.15	39.93
CDY70273	Canola	cytosol, peroxisome	15.04	39.84
CDY26805	Canola	vacuole	17.4	38.82
CDY26807	Canola	cytosol, mitochondrion	66.96	34.34
KXG36845	Sorghum	plastid	49.85	32.25
Bra025645.1-P	Field mustard	cytosol	16.81	25.56

Protein Annotations

KEGG:00450+1.8.1.9	MapMan:10.5.2	Gene3D:3.50.50.60	EntrezGene:8059347	UniProt:C5Y4F1	EnsemblPlants:EES09948
ProteinID:EES09948	ProteinID:EES09948.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019430	GO:GO:0055114
InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469	ScanProsite:PS00573	PANTHER:PTHR42863
PANTHER:PTHR42863:SF9	InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	EnsemblPlantsGene:SORBI_3005G154000	SUPFAM:SSF51905	TIGRFAMs:TIGR01292
InterPro:Thioredox_Rdtase	UniParc:UPI0001A86B72	RefSeq:XP_002450960.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:62507231..62510085

Molecular Weight (calculated)

35466.4 Da

IEP (calculated)

8.469

GRAVY (calculated)

0.077

Length

339 amino acids

Sequence
(BLAST)

001: MEGSAAAAPL RTRVCIIGSG PAAHTAAIYA ARADLKPVLF EGWMANGVAA GGQLTTTTAV ENFPGFPGAI MGGDLMKRCR DQSLRFGTKI VAETVAAVDF
101: SARPFRVVSD KATTVLLADA VIVATGAVAR RLSFPGSDAY WNHGISACAV CDGPAPIFRD RPLAVVGGGD SAMEESSFLT KYGSRVYIVH RRSTFRASKI
201: MQDRVLRNPK IQVVWNSVVV EAFGGADGDG DGGRRLAGVK VKNLVSGEVK DLQVAGLFFA VGHTPATEFL GGQLELDSPS GYVVTKPGST HTSVKGVFAA
301: GDVQDKKYRQ AITAAGSGCM AALDVEHYLQ EVGAQEGQI

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.