Factsheet for HORVU2Hr1G023170.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G058480.1
HORVU2Hr1G023170.1
HORVU2Hr1G038060.1
HORVU2Hr1G087710.1
HORVU3Hr1G111930.2
HORVU4Hr1G013180.1
HORVU4Hr1G069450.3
HORVU5Hr1G019040.1
HORVU5Hr1G109570.1
HORVU5Hr1G116290.1
HORVU5Hr1G125270.1
HORVU5Hr1G125290.3
HORVU7Hr1G010470.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41680.1	HORVU1Hr1G058480.1	AT1G02870.1	21798944
AT2G41680.1	HORVU4Hr1G013180.1	AT1G49850.1	21798944
AT2G41680.1	HORVU4Hr1G069450.3	AT1G49850.1	21798944
AT2G41680.1	HORVU5Hr1G019040.1	AT1G49850.1	21798944
AT2G41680.1	HORVU2Hr1G087710.1	AT1G76760.1	21798944
AT2G41680.1	HORVU3Hr1G111930.2	AT1G76760.1	21798944
AT2G41680.1	HORVU5Hr1G116290.1	AT1G76760.1	21798944
AT2G41680.1	HORVU7Hr1G010470.2	AT1G76760.1	21798944
AT2G41680.1	HORVU2Hr1G023170.1	AT2G41680.1	21798944
AT2G41680.1	HORVU2Hr1G038060.1	AT3G04860.1	21798944
AT2G41680.1	HORVU5Hr1G109570.1	AT3G04860.1	21798944
AT2G41680.1	HORVU5Hr1G125270.1	AT5G40440.1	21798944
AT2G41680.1	HORVU5Hr1G125290.3	AT5G40440.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G154700.1	Wheat	plastid	95.44	88.46
Os07t0657900-02	Rice	plastid	89.63	83.88
GSMUA_Achr8P09560_001	Banana	cytosol	39.63	82.68
KXG36845	Sorghum	plastid	87.34	80.34
PGSC0003DMT400070106	Potato	cytosol	38.38	80.09
GSMUA_Achr8P09570_001	Banana	cytosol	27.8	76.57
KRH33290	Soybean	nucleus	81.12	75.34
Zm00001d022381_P016	Maize	plastid	86.1	75.05
TraesCS2A01G132200.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	92.95	75.04
Bra000234.1-P	Field mustard	plastid	78.84	74.36
Bra004639.1-P	Field mustard	plastid	80.29	74.28
CDY35405	Canola	plastid	78.63	74.17
CDY22534	Canola	plastid	78.42	73.97
KRH72015	Soybean	nucleus	80.08	73.95
AT2G41680.1	Thale cress	plastid	80.5	73.35
VIT_08s0007g08760.t01	Wine grape	plastid	80.08	72.97
CDX79923	Canola	mitochondrion, plastid	80.5	72.66
CDY23835	Canola	plastid	80.91	71.82
Solyc10g080080.1.1	Tomato	plastid	79.46	70.53
PGSC0003DMT400060907	Potato	plastid	78.63	69.8
GSMUA_Achr11P...	Banana	endoplasmic reticulum, vacuole	80.91	68.9
Solyc04g016010.2.1	Tomato	nucleus	72.41	64.99
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	33.2	48.34
HORVU7Hr1G046890.1	Barley	plastid	36.1	44.85
PGSC0003DMT400070103	Potato	plastid	19.5	43.72

Protein Annotations

KEGG:00450+1.8.1.9	MapMan:10.5.2	Gene3D:3.40.30.10	Gene3D:3.50.50.60	UniProt:A0A287HCZ4	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006950
GO:GO:0008047	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0010380	GO:GO:0010581	GO:GO:0016491
GO:GO:0016671	GO:GO:0019430	GO:GO:0019725	GO:GO:0030234	GO:GO:0042744	GO:GO:0042802
GO:GO:0043085	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G023170	EnsemblPlants:HORVU2Hr1G023170.1	InterPro:IPR013766
InterPro:IPR036188	PFAM:PF00085	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469	ScanProsite:PS00194
ScanProsite:PS00573	PFscan:PS51352	PANTHER:PTHR42863	PANTHER:PTHR42863:SF1	InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2
SUPFAM:SSF51905	SUPFAM:SSF52833	TIGRFAMs:TIGR01292	InterPro:Thioredox_Rdtase	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	UniParc:UPI000B4651BE	SEG:seg	:	:	:

Description

Thioredoxin reductase [Source:UniProtKB/TrEMBL;Acc:A0A287HCZ4]

Coordinates

chrchr2H:+:68781934..68787901

Molecular Weight (calculated)

52743.8 Da

IEP (calculated)

5.525

GRAVY (calculated)

-0.284

Length

482 amino acids

Sequence
(BLAST)

001: AASKSKALRA AAAPAADAVD EDAPASPPPS DPGRGVENLV IIGSGPAGYT AAIYAARANL KPVVFEGYQV GGVPGGQLMT TTEVENFPGF PDGITGPDLM
101: DKMRKQAERW GAELHQEDVE FVDVKSRPFV IRSSDREVKC HSVIIATGAT AKRLRLPREE EFWSRGISAC AICDGASPLY KGQVLAVVGG GDTATEEAIY
201: LTKYACHVHL LVRRDQLRAS KAMQDRVLNN PNITVHFNTE AVDVVGNTKG QMSGIQLRRI DTGEEKVLEV KGLFYGIGHT PNSQLLEGQI ELDSSGYILV
301: EEGTAKTSVD GVFAAGDVQD HEWRQAVTAA GSGCIAALSV ERYLVSSDLL IEFHQPVREE KKKEIEGKDV EMGFDITHTK HKGQYALRKL YHGSPRLILV
401: LYTSPTCGPC RTLKPILNKV IDEYDEYVHF VEIDIEEDPE IAEAAGIMGT PCVQFFKNKE MIRTFSGVKM KKEYREFIES NK

Best Arabidopsis Sequence Match ( AT2G41680.1 )
(BLAST)

001: MAASPKIGIG IASVSSPHRV SAASSALSPP PHLFFLTTTT TTRHGGSYLL RQPTRTRSSD SLRLRVSATA NSPSSSSSGG EIIENVVIIG SGPAGYTAAI
101: YAARANLKPV VFEGYQMGGV PGGQLMTTTE VENFPGFPDG ITGPDLMEKM RKQAERWGAE LYPEDVESLS VTTAPFTVQT SERKVKCHSI IYATGATARR
201: LRLPREEEFW SRGISACAIC DGASPLFKGQ VLAVVGGGDT ATEEALYLTK YARHVHLLVR RDQLRASKAM QDRVINNPNI TVHYNTETVD VLSNTKGQMS
301: GILLRRLDTG EETELEAKGL FYGIGHSPNS QLLEGQVELD SSGYVLVREG TSNTSVEGVF AAGDVQDHEW RQAVTAAGSG CIAALSAERY LTSNNLLVEF
401: HQPQTEEAKK EFTQRDVQEK FDITLTKHKG QYALRKLYHE SPRVILVLYT SPTCGPCRTL KPILNKVVDE YNHDVHFVEI DIEEDQEIAE AAGIMGTPCV
501: QFFKNKEMLR TISGVKMKKE YREFIEANK

Arabidopsis Description

NTRCThioredoxin reductase [Source:UniProtKB/TrEMBL;Acc:A0A178VZE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.