Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G233100.1 | Wheat | nucleus | 57.41 | 63.92 |
| TraesCS1B01G245100.1 | Wheat | nucleus | 57.41 | 63.92 |
| TraesCS1A01G228900.1 | Wheat | nucleus | 56.94 | 63.4 |
| Os05t0367100-01 | Rice | mitochondrion | 50.0 | 55.38 |
| EES19406 | Sorghum | mitochondrion | 47.69 | 54.5 |
| Zm00001d037917_P001 | Maize | mitochondrion | 45.83 | 52.38 |
| GSMUA_Achr3P08100_001 | Banana | mitochondrion | 35.19 | 40.0 |
| KRH71564 | Soybean | nucleus | 27.78 | 35.93 |
| Solyc09g075030.2.1 | Tomato | nucleus | 32.41 | 35.71 |
| PGSC0003DMT400029584 | Potato | mitochondrion, nucleus | 31.94 | 35.38 |
| CDY15270 | Canola | mitochondrion | 31.02 | 34.54 |
| CDX89936 | Canola | mitochondrion | 31.02 | 34.54 |
| AT1G02870.1 | Thale cress | mitochondrion | 30.09 | 33.68 |
| KRH31880 | Soybean | nucleus | 25.93 | 33.53 |
| Bra033354.1-P | Field mustard | mitochondrion | 30.09 | 33.51 |
| VIT_07s0005g00270.t01 | Wine grape | mitochondrion, nucleus | 30.09 | 32.99 |
| CDY65862 | Canola | cytosol | 18.98 | 26.62 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G058480.1 | EnsemblPlantsGene:HORVU1Hr1G058480 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000B483E8D | UniProt:A0A287FSM4 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr1H:-:427094732..427098116
Molecular Weight (calculated)
23150.0 Da
IEP (calculated)
7.936
GRAVY (calculated)
0.166
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSRRKFKR TRTKVRVGLP RKKPREFKPA FDLPEALAAA AAAEAGGRVP SWDAEGSVVK NYSAFGVVAN PNLLGAHARG TRGLVQSASL QAPDMDALRA
101: PVDEFGPVDT GSDLECDGQS PTPSPRLITW TGTPAGEFNV SCPVSSGYVA NLVMLMGTLG ALLISFGECA NLVDQLVWHS AVCQPRVMVW LLLFLLFVYV
201: WAYTDGLPLD LISFVL
101: PVDEFGPVDT GSDLECDGQS PTPSPRLITW TGTPAGEFNV SCPVSSGYVA NLVMLMGTLG ALLISFGECA NLVDQLVWHS AVCQPRVMVW LLLFLLFVYV
201: WAYTDGLPLD LISFVL
001: MARSRRKYRN SRAKVRVALP KKNPNIFKPA FNFPPKLRAL MGDDVPEWDD QASVIQNYKS FGVISNPNLL GIRARTDHMI QDDSLNVPPP VEPPTDDPIA
101: KEFEPIDSGS ELEEDDLKTA LGKQRKDGKS APLQPLTTMQ RTHIRRLVEK HGDDIEGMYR DRKLNSMQHS VATLRKLCTR YQIYKDKNPI LVS
101: KEFEPIDSGS ELEEDDLKTA LGKQRKDGKS APLQPLTTMQ RTHIRRLVEK HGDDIEGMYR DRKLNSMQHS VATLRKLCTR YQIYKDKNPI LVS
Arabidopsis Description
At1g02870 [Source:UniProtKB/TrEMBL;Acc:Q8RWK5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.