Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19406 | Sorghum | mitochondrion | 63.68 | 64.02 |
| Zm00001d037917_P001 | Maize | mitochondrion | 62.63 | 62.96 |
| Os05t0367100-01 | Rice | mitochondrion | 63.16 | 61.54 |
| TraesCS1D01G233100.1 | Wheat | nucleus | 61.58 | 60.31 |
| TraesCS1B01G245100.1 | Wheat | nucleus | 61.58 | 60.31 |
| TraesCS1A01G228900.1 | Wheat | nucleus | 61.05 | 59.79 |
| VIT_07s0005g00270.t01 | Wine grape | mitochondrion, nucleus | 60.0 | 57.87 |
| Solyc09g075030.2.1 | Tomato | nucleus | 55.79 | 54.08 |
| KRH71564 | Soybean | nucleus | 47.37 | 53.89 |
| PGSC0003DMT400029584 | Potato | mitochondrion, nucleus | 55.26 | 53.85 |
| KRH31880 | Soybean | nucleus | 46.32 | 52.69 |
| CDX89936 | Canola | mitochondrion | 53.16 | 52.06 |
| AT1G02870.1 | Thale cress | mitochondrion | 52.63 | 51.81 |
| CDY15270 | Canola | mitochondrion | 52.63 | 51.55 |
| Bra033354.1-P | Field mustard | mitochondrion | 52.11 | 51.03 |
| CDY65862 | Canola | cytosol | 37.37 | 46.1 |
| HORVU1Hr1G058480.1 | Barley | mitochondrion | 40.0 | 35.19 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P08100_001 | EnsemblPlants:GSMUA_Achr3T08100_001 | EnsemblPlantsGene:GSMUA_Achr3G08100_001 | InterPro:Ribosome_biogenesis_Nop16 | PANTHER:PTHR13243 | PFAM:PF09420 |
| SEG:seg | UniParc:UPI0002950A89 | UniProt:M0SCS7 | MapMan:17.1.2.2.1.6 | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G08100_001]
Coordinates
chr3:+:5713344..5716232
Molecular Weight (calculated)
20875.2 Da
IEP (calculated)
10.389
GRAVY (calculated)
-0.483
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSRRKYKK SHAKVRVGLP RKKPGVFKPA VAIPEALAAA TADGGKEGTK EWDVKGSVIR NYQAFGVVSN PNILSVRART PQIVQLSTLQ VPDPEFTPVS
101: EFDPIDSGSD LESDDVKSAL GKKRRDGKAA SLRPLTAMQR VHVGKLIEKY GDDYQAMFMD TALNAMQHSV AALKKLCERY YVGGKHYITS
101: EFDPIDSGSD LESDDVKSAL GKKRRDGKAA SLRPLTAMQR VHVGKLIEKY GDDYQAMFMD TALNAMQHSV AALKKLCERY YVGGKHYITS
001: MARSRRKYRN SRAKVRVALP KKNPNIFKPA FNFPPKLRAL MGDDVPEWDD QASVIQNYKS FGVISNPNLL GIRARTDHMI QDDSLNVPPP VEPPTDDPIA
101: KEFEPIDSGS ELEEDDLKTA LGKQRKDGKS APLQPLTTMQ RTHIRRLVEK HGDDIEGMYR DRKLNSMQHS VATLRKLCTR YQIYKDKNPI LVS
101: KEFEPIDSGS ELEEDDLKTA LGKQRKDGKS APLQPLTTMQ RTHIRRLVEK HGDDIEGMYR DRKLNSMQHS VATLRKLCTR YQIYKDKNPI LVS
Arabidopsis Description
At1g02870 [Source:UniProtKB/TrEMBL;Acc:Q8RWK5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.