Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15270 | Canola | mitochondrion | 93.78 | 93.3 |
| CDX89936 | Canola | mitochondrion | 92.75 | 92.27 |
| Bra033354.1-P | Field mustard | mitochondrion | 92.75 | 92.27 |
| CDY65862 | Canola | cytosol | 69.95 | 87.66 |
| PGSC0003DMT400029584 | Potato | mitochondrion, nucleus | 67.36 | 66.67 |
| Solyc09g075030.2.1 | Tomato | nucleus | 67.36 | 66.33 |
| KRH71564 | Soybean | nucleus | 53.89 | 62.28 |
| KRH31880 | Soybean | nucleus | 53.37 | 61.68 |
| VIT_07s0005g00270.t01 | Wine grape | mitochondrion, nucleus | 62.69 | 61.42 |
| EES19406 | Sorghum | mitochondrion | 53.37 | 54.5 |
| Zm00001d037917_P001 | Maize | mitochondrion | 52.85 | 53.97 |
| Os05t0367100-01 | Rice | mitochondrion | 53.89 | 53.33 |
| GSMUA_Achr3P08100_001 | Banana | mitochondrion | 51.81 | 52.63 |
| TraesCS1B01G245100.1 | Wheat | nucleus | 52.85 | 52.58 |
| TraesCS1D01G233100.1 | Wheat | nucleus | 52.85 | 52.58 |
| TraesCS1A01G228900.1 | Wheat | nucleus | 52.33 | 52.06 |
| HORVU1Hr1G058480.1 | Barley | mitochondrion | 33.68 | 30.09 |
Protein Annotations
| MapMan:17.1.2.2.1.6 | EntrezGene:839496 | ProteinID:AEE27487.1 | ArrayExpress:AT1G02870 | EnsemblPlantsGene:AT1G02870 | RefSeq:AT1G02870 |
| TAIR:AT1G02870 | RefSeq:AT1G02870-TAIR-G | EnsemblPlants:AT1G02870.1 | TAIR:AT1G02870.1 | EMBL:AY088317 | EMBL:AY093033 |
| Unigene:At.46895 | EMBL:BT006570 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005730 | GO:GO:0008150 | GO:GO:0042273 | RefSeq:NP_563668.1 | PFAM:PF09420 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR13243 | UniProt:Q8RWK5 | InterPro:Ribosome_biogenesis_Nop16 | UniParc:UPI00000A5DE0 | SEG:seg | : |
Description
At1g02870 [Source:UniProtKB/TrEMBL;Acc:Q8RWK5]
Coordinates
chr1:-:637214..638681
Molecular Weight (calculated)
22104.5 Da
IEP (calculated)
10.174
GRAVY (calculated)
-0.842
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MARSRRKYRN SRAKVRVALP KKNPNIFKPA FNFPPKLRAL MGDDVPEWDD QASVIQNYKS FGVISNPNLL GIRARTDHMI QDDSLNVPPP VEPPTDDPIA
101: KEFEPIDSGS ELEEDDLKTA LGKQRKDGKS APLQPLTTMQ RTHIRRLVEK HGDDIEGMYR DRKLNSMQHS VATLRKLCTR YQIYKDKNPI LVS
101: KEFEPIDSGS ELEEDDLKTA LGKQRKDGKS APLQPLTTMQ RTHIRRLVEK HGDDIEGMYR DRKLNSMQHS VATLRKLCTR YQIYKDKNPI LVS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.