Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 5
  • cytosol 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033354.1-P Field mustard mitochondrion 97.94 97.94
CDX89936 Canola mitochondrion 97.42 97.42
AT1G02870.1 Thale cress mitochondrion 93.3 93.78
CDY65862 Canola cytosol 72.68 91.56
PGSC0003DMT400029584 Potato mitochondrion, nucleus 69.07 68.72
Solyc09g075030.2.1 Tomato nucleus 68.04 67.35
KRH71564 Soybean nucleus 55.67 64.67
KRH31880 Soybean nucleus 55.67 64.67
VIT_07s0005g00270.t01 Wine grape mitochondrion, nucleus 65.46 64.47
EES19406 Sorghum mitochondrion 54.64 56.08
Zm00001d037917_P001 Maize mitochondrion 54.64 56.08
TraesCS1B01G245100.1 Wheat nucleus 55.15 55.15
TraesCS1D01G233100.1 Wheat nucleus 55.15 55.15
Os05t0367100-01 Rice mitochondrion 55.15 54.87
TraesCS1A01G228900.1 Wheat nucleus 54.64 54.64
GSMUA_Achr3P08100_001 Banana mitochondrion 51.55 52.63
HORVU1Hr1G058480.1 Barley mitochondrion 34.54 31.02
Protein Annotations
EnsemblPlants:CDY15270EnsemblPlantsGene:GSBRNA2T00085472001InterPro:Ribosome_biogenesis_Nop16PANTHER:PTHR13243PFAM:PF09420ProteinID:CDY15270
ProteinID:CDY15270.1SEG:segUniParc:UPI0004EDF138UniProt:A0A078FLE9MapMan:17.1.2.2.1.6:
Description
BnaC05g01490DBnaC05g01490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLE9]
Coordinates
chrLK032052:-:768944..769986
Molecular Weight (calculated)
22248.7 Da
IEP (calculated)
10.042
GRAVY (calculated)
-0.869
Length
194 amino acids
Sequence
(BLAST)
001: MARSRRKYKN SRAKVRVALP KKNPNIFKPA FNFPPKLRAL MADDVPEWDD QASVIQNYKS FGVISNPNLL GIRSRTDHMI QDDSLNVPPP PEPPSDDPVA
101: KEFEPIDSGS ELEEDDLKTA LGKQRKDGKS APLQPLTTMQ RTHIRRLVEK HGDDIESMYR DRKLNSMQHS VATLQKLCTR YHMYKDKNPV LVPF
Best Arabidopsis Sequence Match ( AT1G02870.1 )
(BLAST)
001: MARSRRKYRN SRAKVRVALP KKNPNIFKPA FNFPPKLRAL MGDDVPEWDD QASVIQNYKS FGVISNPNLL GIRARTDHMI QDDSLNVPPP VEPPTDDPIA
101: KEFEPIDSGS ELEEDDLKTA LGKQRKDGKS APLQPLTTMQ RTHIRRLVEK HGDDIEGMYR DRKLNSMQHS VATLRKLCTR YQIYKDKNPI LVS
Arabidopsis Description
At1g02870 [Source:UniProtKB/TrEMBL;Acc:Q8RWK5]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.