Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G233100.1 | Wheat | nucleus | 84.1 | 84.54 |
| TraesCS1B01G245100.1 | Wheat | nucleus | 84.1 | 84.54 |
| EES19406 | Sorghum | mitochondrion | 81.54 | 84.13 |
| TraesCS1A01G228900.1 | Wheat | nucleus | 83.59 | 84.02 |
| Zm00001d037917_P001 | Maize | mitochondrion | 79.49 | 82.01 |
| GSMUA_Achr3P08100_001 | Banana | mitochondrion | 61.54 | 63.16 |
| KRH71564 | Soybean | nucleus | 48.21 | 56.29 |
| CDX89936 | Canola | mitochondrion | 55.38 | 55.67 |
| CDY15270 | Canola | mitochondrion | 54.87 | 55.15 |
| KRH31880 | Soybean | nucleus | 47.18 | 55.09 |
| PGSC0003DMT400029584 | Potato | mitochondrion, nucleus | 54.87 | 54.87 |
| Solyc09g075030.2.1 | Tomato | nucleus | 54.87 | 54.59 |
| Bra033354.1-P | Field mustard | mitochondrion | 53.85 | 54.12 |
| AT1G02870.1 | Thale cress | mitochondrion | 53.33 | 53.89 |
| VIT_07s0005g00270.t01 | Wine grape | mitochondrion, nucleus | 54.36 | 53.81 |
| CDY65862 | Canola | cytosol | 40.0 | 50.65 |
| HORVU1Hr1G058480.1 | Barley | mitochondrion | 55.38 | 50.0 |
Protein Annotations
| EMBL:AK108334 | EnsemblPlants:Os05t0367100-01 | EnsemblPlantsGene:Os05g0367100 | EntrezGene:4338564 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0008150 | GO:GO:0042273 | InterPro:Ribosome_biogenesis_Nop16 |
| PANTHER:PTHR13243 | PFAM:PF09420 | ProteinID:AAT38013.1 | ProteinID:AAV31363.1 | ProteinID:BAF17249.1 | ProteinID:BAS93651.1 |
| RefSeq:XP_015637960.1 | SEG:seg | UniParc:UPI0000376BD1 | UniProt:Q6L594 | MapMan:17.1.2.2.1.6 | : |
Description
Ribosome biogenesis protein Nop16 domain containing protein. (Os05t0367100-01)
Coordinates
chr5:-:17631001..17633319
Molecular Weight (calculated)
21153.5 Da
IEP (calculated)
10.317
GRAVY (calculated)
-0.481
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSRRKLKR SRAQVKVGLP RKKPREFKPA FDLPEALAAA AAAEGGGHAP SWDAEGSVVK NYAAFGVVAN PNLLGAHARG TPRLVQSAPL QAPDIDAARA
101: PVDEFEPVDS GSDLESDDLK SALGKQRRDG KSAPLEPLTK VQRIYIGRLI EKHGDDYKAM FMDIKLNTMQ HSVGTLKKLC ERYHVVGKSI IHPLK
101: PVDEFEPVDS GSDLESDDLK SALGKQRRDG KSAPLEPLTK VQRIYIGRLI EKHGDDYKAM FMDIKLNTMQ HSVGTLKKLC ERYHVVGKSI IHPLK
001: MARSRRKYRN SRAKVRVALP KKNPNIFKPA FNFPPKLRAL MGDDVPEWDD QASVIQNYKS FGVISNPNLL GIRARTDHMI QDDSLNVPPP VEPPTDDPIA
101: KEFEPIDSGS ELEEDDLKTA LGKQRKDGKS APLQPLTTMQ RTHIRRLVEK HGDDIEGMYR DRKLNSMQHS VATLRKLCTR YQIYKDKNPI LVS
101: KEFEPIDSGS ELEEDDLKTA LGKQRKDGKS APLQPLTTMQ RTHIRRLVEK HGDDIEGMYR DRKLNSMQHS VATLRKLCTR YQIYKDKNPI LVS
Arabidopsis Description
At1g02870 [Source:UniProtKB/TrEMBL;Acc:Q8RWK5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.