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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • plastid 3
  • cytosol 1
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 3
  • plasma membrane 2
  • golgi 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, vacuole
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:plastid
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr1P13230_001
GSMUA_Achr3P08100_001
GSMUA_Achr3P31620_001
GSMUA_Achr4P32570_001
GSMUA_Achr5P24690_001
GSMUA_Achr6P24690_001
GSMUA_Achr6P25720_001
GSMUA_Achr7P01840_001
GSMUA_Achr7P07540_001
GSMUA_Achr8P09560_001
GSMUA_Achr8P09570_001
GSMUA_Achr9P18700_001
GSMUA_Achr9P18710_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G41680.1 GSMUA_Achr3P08100_001 AT1G02870.1 21798944
AT2G41680.1 GSMUA_Achr4P32570_001 AT1G49850.1 21798944
AT2G41680.1 GSMUA_Achr6P24690_001 AT1G49850.1 21798944
AT2G41680.1 GSMUA_Achr1P13230_001 AT1G76760.1 21798944
AT2G41680.1 GSMUA_Achr6P25720_001 AT1G76760.1 21798944
AT2G41680.1 GSMUA_Achr11P... AT2G41680.1 21798944
AT2G41680.1 GSMUA_Achr8P09560_001 AT2G41680.1 21798944
AT2G41680.1 GSMUA_Achr8P09570_001 AT2G41680.1 21798944
AT2G41680.1 GSMUA_Achr5P24690_001 AT3G04860.1 21798944
AT2G41680.1 GSMUA_Achr7P01840_001 AT3G04860.1 21798944
AT2G41680.1 GSMUA_Achr7P07540_001 AT3G04860.1 21798944
AT2G41680.1 GSMUA_Achr3P31620_001 AT4G10930.1 21798944
AT2G41680.1 GSMUA_Achr9P18700_001 AT5G40440.1 21798944
AT2G41680.1 GSMUA_Achr9P18710_001 AT5G40440.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P09560_001 Banana cytosol 37.28 91.34
PGSC0003DMT400070106 Potato cytosol 34.28 83.98
GSMUA_Achr8P09570_001 Banana cytosol 25.09 81.14
HORVU2Hr1G023170.1 Barley cytosol 68.9 80.91
KXG36845 Sorghum plastid 71.55 77.29
Os07t0657900-02 Rice plastid 70.32 77.28
KRH33290 Soybean nucleus 69.26 75.53
KRH72015 Soybean nucleus 69.61 75.48
VIT_08s0007g08760.t01 Wine grape plastid 70.32 75.24
TraesCS2B01G154700.1 Wheat plastid 69.08 75.19
Bra000234.1-P Field mustard plastid 66.96 74.17
CDY35405 Canola plastid 66.78 73.97
CDY22534 Canola plastid 66.78 73.97
Bra004639.1-P Field mustard plastid 68.02 73.9
Solyc10g080080.1.1 Tomato plastid 70.67 73.66
PGSC0003DMT400060907 Potato plastid 70.32 73.3
Zm00001d022381_P016 Maize plastid 71.55 73.24
CDX79923 Canola mitochondrion, plastid 68.2 72.28
AT2G41680.1 Thale cress plastid 67.14 71.83
CDY23835 Canola plastid 68.2 71.09
Solyc04g016010.2.1 Tomato nucleus 65.55 69.09
TraesCS2A01G132200.1 Wheat endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 69.26 65.66
PGSC0003DMT400070103 Potato plastid 18.2 47.91
GSMUA_Achr9P27590_001 Banana mitochondrion 29.15 46.61
Protein Annotations
KEGG:00450+1.8.1.9MapMan:10.5.2Gene3D:3.40.30.10Gene3D:3.50.50.60InterPro:FAD/NAD-bd_sfInterPro:FAD/NAD-binding_dom
GO:GO:0003674GO:GO:0003824GO:GO:0004791GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005975GO:GO:0006950GO:GO:0008047
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009507GO:GO:0009536
GO:GO:0009570GO:GO:0009987GO:GO:0010380GO:GO:0010581GO:GO:0016491GO:GO:0016671
GO:GO:0019430GO:GO:0019725GO:GO:0030234GO:GO:0042744GO:GO:0042802GO:GO:0043085
GO:GO:0045454GO:GO:0055114EnsemblPlantsGene:GSMUA_Achr11G06090_001EnsemblPlants:GSMUA_Achr11P06090_001EnsemblPlants:GSMUA_Achr11T06090_001InterPro:IPR013766
InterPro:IPR036188UniProt:M0RPT9PFAM:PF00085PFAM:PF07992PRINTS:PR00368PRINTS:PR00469
ScanProsite:PS00573PFscan:PS51352PANTHER:PTHR42863PANTHER:PTHR42863:SF1InterPro:Pyr_nucl-diS_OxRdtase_2_ASInterPro:Pyridine_nuc-diS_OxRdtase_2
SUPFAM:SSF51905SUPFAM:SSF52833TIGRFAMs:TIGR01292InterPro:Thioredox_RdtaseInterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domain
UniParc:UPI000296A206SEG:seg::::
Description
Thioredoxin reductase NTRC [Source:GMGC_GENE;Acc:GSMUA_Achr11G06090_001]
Coordinates
chr11:+:4655334..4670158
Molecular Weight (calculated)
61743.2 Da
IEP (calculated)
7.106
GRAVY (calculated)
-0.109
Length
566 amino acids
Sequence
(BLAST)
001: MTRRPLSTNE TLTQTPVYLF LSAAISLSSL RLLFLPSPIQ MAVSPVGLTA VVSVAAPSTS SLPCHRPILL RVPPLRCPSR RPLNSWVGRR ASAPVSATPA
101: ASSTDEVAAV SPSGDSSSGI ENLVIIGSGP AGYTAAIYAA RANLKPVVFE GYQVGGVPGG QLMTTTEVEN FPGFPEGITG PDLMDRIRRQ AERWGAELFQ
201: EDVEFVVVRT NPFIIRSSER EVKCHSLIIA TGANAKRLRL PREDEFWSRG ISACAICDGA SPLFKGQVLA VVGGGDTATE EALYLTKYAR HVHLLVRKNH
301: LRASKAMQDR VFNNPNVTVH FNTEAMDVVS NSKGQMSGVL TKRVDTGEES VLDVKGLFYG IGHTPNSQLL EGQIELDSSG YILVKEGTAK TSVEGVFAAG
401: DVQDHEWRQA ITAAGSGCVA ALSVERYLVS NNLLVEFHQP VTEDVKKELT DKDVQMGFDI TLTKHKGQYA LRKLYHESPR LLCVLYTAPT CGPCRTLKPI
501: LSKVIDEFDQ NVHFVEIDIE EDPEIAEAAG IMGTPCVQFF KKREMLRTVP GVKMKKEYRE FIEANK
Best Arabidopsis Sequence Match ( AT2G41680.1 )
(BLAST)
001: MAASPKIGIG IASVSSPHRV SAASSALSPP PHLFFLTTTT TTRHGGSYLL RQPTRTRSSD SLRLRVSATA NSPSSSSSGG EIIENVVIIG SGPAGYTAAI
101: YAARANLKPV VFEGYQMGGV PGGQLMTTTE VENFPGFPDG ITGPDLMEKM RKQAERWGAE LYPEDVESLS VTTAPFTVQT SERKVKCHSI IYATGATARR
201: LRLPREEEFW SRGISACAIC DGASPLFKGQ VLAVVGGGDT ATEEALYLTK YARHVHLLVR RDQLRASKAM QDRVINNPNI TVHYNTETVD VLSNTKGQMS
301: GILLRRLDTG EETELEAKGL FYGIGHSPNS QLLEGQVELD SSGYVLVREG TSNTSVEGVF AAGDVQDHEW RQAVTAAGSG CIAALSAERY LTSNNLLVEF
401: HQPQTEEAKK EFTQRDVQEK FDITLTKHKG QYALRKLYHE SPRVILVLYT SPTCGPCRTL KPILNKVVDE YNHDVHFVEI DIEEDQEIAE AAGIMGTPCV
501: QFFKNKEMLR TISGVKMKKE YREFIEANK
Arabidopsis Description
NTRCThioredoxin reductase [Source:UniProtKB/TrEMBL;Acc:A0A178VZE7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.