Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- mitochondrion 5
- golgi 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRG89057 | |
| KRG92744 | |
| KRG92967 | |
| KRG93576 | |
| KRG93629 | |
| KRG95930 | |
| KRG96400 | |
| KRG96473 | |
| KRG96941 | |
| KRG97436 | |
| KRG98102 | |
| KRH01512 | |
| KRH03454 | |
| KRH04214 | |
| KRH04217 | |
| KRH04512 | |
| KRH04718 | |
| KRH04720 | |
| KRH05964 | |
| KRH06932 | |
| KRH08064 | |
| KRH08094 | |
| KRH08728 | |
| KRH12095 | |
| KRH13277 | |
| KRH14914 | |
| KRH16362 | |
| KRH17252 | |
| KRH17444 | |
| KRH18402 | |
| KRH18448 | |
| KRH19812 | |
| KRH24942 | |
| KRH25819 | |
| KRH25821 | |
| KRH27864 | |
| KRH27874 | |
| KRH28784 | |
| KRH30101 | |
| KRH31467 | |
| KRH31847 | |
| KRH31849 | |
| KRH32405 | |
| KRH34063 | |
| KRH36218 | |
| KRH40042 | |
| KRH41370 | |
| KRH41372 | |
| KRH41719 | |
| KRH41748 | |
| KRH42661 | |
| KRH45201 | |
| KRH50326 | |
| KRH53395 | |
| KRH53763 | |
| KRH54535 | |
| KRH55344 | |
| KRH55687 | |
| KRH55704 | |
| KRH56320 | |
| KRH56423 | |
| KRH56926 | |
| KRH57998 | |
| KRH58763 | |
| KRH60086 | |
| KRH60091 | |
| KRH60418 | |
| KRH60450 | |
| KRH62493 | |
| KRH62765 | |
| KRH62796 | |
| KRH63367 | |
| KRH64028 | |
| KRH64187 | |
| KRH64544 | |
| KRH65626 | |
| KRH67642 | |
| KRH68137 | |
| KRH68153 | |
| KRH68219 | |
| KRH68706 | |
| KRH69268 | |
| KRH69269 | |
| KRH69777 | |
| KRH69797 | |
| KRH70352 | |
| KRH70668 | |
| KRH72901 | |
| KRH73264 | |
| KRH76010 | |
| KRH76216 | |
| KRH76671 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G26980.1 | KRG96400 | AT1G02780.1 | 24556609 |
| AT5G26980.1 | KRG96473 | AT1G02780.1 | 24556609 |
| AT5G26980.1 | KRH31847 | AT1G02780.1 | 24556609 |
| AT5G26980.1 | KRH31849 | AT1G02780.1 | 24556609 |
| AT5G26980.1 | KRH68137 | AT1G02780.1 | 24556609 |
| AT5G26980.1 | KRH68219 | AT1G02780.1 | 24556609 |
| AT5G26980.1 | KRH69268 | AT1G02780.1 | 24556609 |
| AT5G26980.1 | KRH69269 | AT1G02780.1 | 24556609 |
| AT5G26980.1 | KRH76216 | AT1G02780.1 | 24556609 |
| AT5G26980.1 | KRG98102 | AT1G14320.1 | 24556609 |
| AT5G26980.1 | KRG97436 | AT1G27400.1 | 24556609 |
| AT5G26980.1 | KRH08728 | AT1G27400.1 | 24556609 |
| AT5G26980.1 | KRH31467 | AT1G27400.1 | 24556609 |
| AT5G26980.1 | KRH42661 | AT1G27400.1 | 24556609 |
| AT5G26980.1 | KRH58763 | AT1G27400.1 | 24556609 |
| AT5G26980.1 | KRH27864 | AT1G58380.1 | 24556609 |
| AT5G26980.1 | KRH27874 | AT1G58380.1 | 24556609 |
| AT5G26980.1 | KRH41719 | AT1G58380.1 | 24556609 |
| AT5G26980.1 | KRH60418 | AT1G58380.1 | 24556609 |
| AT5G26980.1 | KRH70352 | AT1G58380.1 | 24556609 |
| AT5G26980.1 | KRH53395 | AT1G77140.1 | 10888666 |
| AT5G26980.1 | KRH64544 | AT1G77140.1 | 10888666 |
| AT5G26980.1 | KRH53395 | AT1G77140.1 | 24556609 |
| AT5G26980.1 | KRH64544 | AT1G77140.1 | 24556609 |
| AT5G26980.1 | KRH04718 | AT2G17360.1 | 24556609 |
| AT5G26980.1 | KRH04720 | AT2G17360.1 | 24556609 |
| AT5G26980.1 | KRH08064 | AT2G17360.1 | 24556609 |
| AT5G26980.1 | KRH14914 | AT2G17360.1 | 24556609 |
| AT5G26980.1 | KRH65626 | AT2G17360.1 | 24556609 |
| AT5G26980.1 | KRH69777 | AT2G17360.1 | 24556609 |
| AT5G26980.1 | KRH73264 | AT2G17360.1 | 24556609 |
| AT5G26980.1 | KRH76010 | AT2G17360.1 | 24556609 |
| AT5G26980.1 | KRH08094 | AT2G18020.1 | 24556609 |
| AT5G26980.1 | KRH28784 | AT2G18020.1 | 24556609 |
| AT5G26980.1 | KRH69797 | AT2G18020.1 | 24556609 |
| AT5G26980.1 | KRH76671 | AT2G18020.1 | 24556609 |
| AT5G26980.1 | KRG92967 | AT2G39390.1 | 24556609 |
| AT5G26980.1 | KRH36218 | AT2G39390.1 | 24556609 |
| AT5G26980.1 | KRH04512 | AT2G40510.1 | 24556609 |
| AT5G26980.1 | KRH06932 | AT2G40510.1 | 24556609 |
| AT5G26980.1 | KRH17252 | AT2G40510.1 | 24556609 |
| AT5G26980.1 | KRH53763 | AT2G40510.1 | 24556609 |
| AT5G26980.1 | KRH57998 | AT2G40510.1 | 24556609 |
| AT5G26980.1 | KRH64187 | AT2G40510.1 | 24556609 |
| AT5G26980.1 | KRH72901 | AT2G40510.1 | 24556609 |
| AT5G26980.1 | KRH12095 | AT2G42740.1 | 24556609 |
| AT5G26980.1 | KRH13277 | AT2G42740.1 | 24556609 |
| AT5G26980.1 | KRH16362 | AT2G42740.1 | 24556609 |
| AT5G26980.1 | KRH25819 | AT2G42740.1 | 24556609 |
| AT5G26980.1 | KRH25821 | AT2G42740.1 | 24556609 |
| AT5G26980.1 | KRH55687 | AT2G42740.1 | 24556609 |
| AT5G26980.1 | KRH55704 | AT2G42740.1 | 24556609 |
| AT5G26980.1 | KRH56320 | AT2G42740.1 | 24556609 |
| AT5G26980.1 | KRH56423 | AT2G42740.1 | 24556609 |
| AT5G26980.1 | KRH62493 | AT2G42740.1 | 24556609 |
| AT5G26980.1 | KRH62765 | AT2G42740.1 | 24556609 |
| AT5G26980.1 | KRG93629 | AT3G02080.1 | 24556609 |
| AT5G26980.1 | KRH18402 | AT3G02080.1 | 24556609 |
| AT5G26980.1 | KRH30101 | AT3G02080.1 | 24556609 |
| AT5G26980.1 | KRH62796 | AT3G02080.1 | 24556609 |
| AT5G26980.1 | KRH41748 | AT3G04230.1 | 24556609 |
| AT5G26980.1 | KRH50326 | AT3G04230.1 | 24556609 |
| AT5G26980.1 | KRH60450 | AT3G04230.1 | 24556609 |
| AT5G26980.1 | KRH70668 | AT3G04230.1 | 24556609 |
| AT5G26980.1 | KRG92744 | AT3G04920.1 | 24556609 |
| AT5G26980.1 | KRG96941 | AT3G04920.1 | 24556609 |
| AT5G26980.1 | KRH04214 | AT3G04920.1 | 24556609 |
| AT5G26980.1 | KRH04217 | AT3G04920.1 | 24556609 |
| AT5G26980.1 | KRH34063 | AT3G04920.1 | 24556609 |
| AT5G26980.1 | KRH64028 | AT3G04920.1 | 24556609 |
| AT5G26980.1 | KRH68706 | AT3G04920.1 | 24556609 |
| AT5G26980.1 | KRH68153 | AT3G20370.1 | 24556609 |
| AT5G26980.1 | KRH05964 | AT4G24190.1 | 24556609 |
| AT5G26980.1 | KRH17444 | AT4G24190.1 | 24556609 |
| AT5G26980.1 | KRG89057 | AT5G02960.1 | 24556609 |
| AT5G26980.1 | KRG95930 | AT5G02960.1 | 24556609 |
| AT5G26980.1 | KRH19812 | AT5G02960.1 | 24556609 |
| AT5G26980.1 | KRH24942 | AT5G02960.1 | 24556609 |
| AT5G26980.1 | KRH32405 | AT5G02960.1 | 24556609 |
| AT5G26980.1 | KRH55344 | AT5G02960.1 | 24556609 |
| AT5G26980.1 | KRH67642 | AT5G02960.1 | 24556609 |
| AT5G26980.1 | KRH01512 | AT5G13300.1 | 15743878 |
| AT5G26980.1 | KRH45201 | AT5G13300.1 | 15743878 |
| AT5G26980.1 | KRH03454 | AT5G15200.1 | 24556609 |
| AT5G26980.1 | KRH54535 | AT5G15200.1 | 24556609 |
| AT5G26980.1 | KRH56926 | AT5G15200.1 | 24556609 |
| AT5G26980.1 | KRH63367 | AT5G15200.1 | 24556609 |
| AT5G26980.1 | KRH41370 | AT5G28540.1 | 24556609 |
| AT5G26980.1 | KRH41372 | AT5G28540.1 | 24556609 |
| AT5G26980.1 | KRH60086 | AT5G28540.1 | 24556609 |
| AT5G26980.1 | KRH60091 | AT5G28540.1 | 24556609 |
| AT5G26980.1 | KRG93576 | AT5G39510.1 | 10888666 |
| AT5G26980.1 | KRH18448 | AT5G39510.1 | 10888666 |
| AT5G26980.1 | KRH40042 | AT5G39510.1 | 10888666 |
| AT5G26980.1 | KRG93629 | AT5G61170.1 | 24556609 |
| AT5G26980.1 | KRH18402 | AT5G61170.1 | 24556609 |
| AT5G26980.1 | KRH30101 | AT5G61170.1 | 24556609 |
| AT5G26980.1 | KRH62796 | AT5G61170.1 | 24556609 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH33850 | Soybean | endoplasmic reticulum | 95.71 | 95.71 |
| Solyc01g100170.2.1 | Tomato | mitochondrion | 81.29 | 81.79 |
| VIT_14s0060g01540.t01 | Wine grape | mitochondrion | 81.6 | 81.35 |
| Bra040527.1-P | Field mustard | mitochondrion | 75.77 | 77.67 |
| CDY18808 | Canola | mitochondrion | 75.46 | 77.36 |
| AT5G26980.1 | Thale cress | mitochondrion | 76.07 | 77.02 |
| CDY05193 | Canola | mitochondrion | 74.23 | 76.34 |
| AT3G05710.2 | Thale cress | mitochondrion | 77.3 | 76.13 |
| Bra039417.1-P | Field mustard | mitochondrion | 73.62 | 75.71 |
| CDY27747 | Canola | mitochondrion | 73.62 | 75.71 |
| TraesCS7D01G044300.1 | Wheat | cytosol | 54.6 | 74.79 |
| OQU86127 | Sorghum | mitochondrion | 74.54 | 74.54 |
| Zm00001d039404_P001 | Maize | plasma membrane | 73.62 | 74.3 |
| Zm00001d013996_P003 | Maize | mitochondrion | 72.7 | 74.06 |
| GSMUA_Achr4P18460_001 | Banana | mitochondrion | 74.85 | 72.84 |
| PGSC0003DMT400063615 | Potato | mitochondrion | 81.9 | 72.75 |
| Os06t0116300-01 | Rice | plasma membrane | 73.62 | 72.73 |
| GSMUA_Achr11P... | Banana | mitochondrion | 72.39 | 72.62 |
| KRG96492 | Soybean | plastid | 71.78 | 72.22 |
| KRH68233 | Soybean | plastid | 70.25 | 71.56 |
| TraesCS7A01G049200.1 | Wheat | mitochondrion | 71.78 | 71.34 |
| GSMUA_Achr10P... | Banana | mitochondrion | 71.78 | 70.91 |
| HORVU7Hr1G008670.5 | Barley | mitochondrion | 72.09 | 64.92 |
| Zm00001d045530_P001 | Maize | cytosol | 17.79 | 64.44 |
| TraesCS4A01G435000.1 | Wheat | mitochondrion | 64.72 | 64.33 |
| EER87742 | Sorghum | mitochondrion | 46.93 | 64.29 |
| HORVU7Hr1G008640.2 | Barley | mitochondrion | 45.09 | 56.54 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | EntrezGene:100796741 | MapMan:22.7.1.4 | EMBL:ACUP02012773 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_20G239100 | GO:GO:0000149 | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0006906 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0012505 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016192 | GO:GO:0031201 | GO:GO:0048278 | UniProt:I1NJ45 | InterPro:IPR000727 |
| EnsemblPlants:KRG92945 | ProteinID:KRG92945 | ProteinID:KRG92945.1 | PFAM:PF05739 | ScanProsite:PS00914 | PFscan:PS50192 |
| PANTHER:PTHR19957 | PANTHER:PTHR19957:SF83 | SMART:SM00397 | SMART:SM00503 | InterPro:SNARE | SUPFAM:SSF47661 |
| InterPro:Syntaxin/epimorphin_CS | InterPro:Syntaxin_N | TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI000233DDDB | : |
Description
hypothetical protein
Coordinates
chr20:+:47055620..47060281
Molecular Weight (calculated)
36321.8 Da
IEP (calculated)
9.036
GRAVY (calculated)
-0.419
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRNRTLLF RKHRDALKSV RVPSISSPPF TASGAGGGPV IELATTSFLN PNRSYAPLST EDPGNSSRGP NAITVGLPPA WVDLSEEISA NVQRARTKMA
101: ELAKAHSKAL MPSFGDGKED QRAIETLTHE ITDLIKKSEK RLRRLSATGP SEDSNVRKNV QRSLATDLQN LSVELRKKQS TYLKRLRQQK EGQDGVDLEM
201: LNGSKSRYED DDLDNMVFNE HQMAKLKNSE AFTVEREKEI QQVVESVNEL AQIMKDLSVL VIDQGTIVDR IDYNIQNVAT TVEDGLKQLQ KAERTQKKGG
301: MVMCATVLLI MCFVMLVLLI IKEIIL
101: ELAKAHSKAL MPSFGDGKED QRAIETLTHE ITDLIKKSEK RLRRLSATGP SEDSNVRKNV QRSLATDLQN LSVELRKKQS TYLKRLRQQK EGQDGVDLEM
201: LNGSKSRYED DDLDNMVFNE HQMAKLKNSE AFTVEREKEI QQVVESVNEL AQIMKDLSVL VIDQGTIVDR IDYNIQNVAT TVEDGLKQLQ KAERTQKKGG
301: MVMCATVLLI MCFVMLVLLI IKEIIL
001: MATRNRTLLF RKYRNSLRSV RAPMGSSSSS TLTEHNSLTG AKSGLGPVIE MASTSLLNPN RSYAPVSTED PGNSSRGTIT VGLPPDWVDV SEEISVYIQR
101: ARTKMAELGK AHAKALMPSF GDGKEDQHQI ETLTQEVTFL LKKSEKQLQR LSAAGPSEDS NVRKNVQRSL ATDLQNLSME LRKKQSTYLK RLRLQKEDGA
201: DLEMNLNGSR YKAEDDDFDD MVFSEHQMSK IKKSEEISIE REKEIQQVVE SVSELAQIMK DLSALVIDQG TIVDRIDYNI QNVASTVDDG LKQLQKAERT
301: QRQGGMVMCA SVLVILCFIM LVLLILKEIL L
101: ARTKMAELGK AHAKALMPSF GDGKEDQHQI ETLTQEVTFL LKKSEKQLQR LSAAGPSEDS NVRKNVQRSL ATDLQNLSME LRKKQSTYLK RLRLQKEDGA
201: DLEMNLNGSR YKAEDDDFDD MVFSEHQMSK IKKSEEISIE REKEIQQVVE SVSELAQIMK DLSALVIDQG TIVDRIDYNI QNVASTVDDG LKQLQKAERT
301: QRQGGMVMCA SVLVILCFIM LVLLILKEIL L
Arabidopsis Description
SYP43Syntaxin-43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUJ1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.