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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • nucleus 1
  • mitochondrion 5
  • golgi 1
  • cytosol 1
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P00120_001
GSMUA_Achr1P07160_001
GSMUA_Achr1P07620_001
GSMUA_Achr1P12890_001
GSMUA_Achr1P13080_001
GSMUA_Achr1P21580_001
GSMUA_Achr1P22950_001
GSMUA_Achr1P26610_001
GSMUA_Achr2P01640_001
GSMUA_Achr2P06950_001
GSMUA_Achr2P07800_001
GSMUA_Achr2P15660_001
GSMUA_Achr2P16120_001
GSMUA_Achr2P22080_001
GSMUA_Achr2P22920_001
GSMUA_Achr2P23030_001
GSMUA_Achr3P00760_001
GSMUA_Achr3P01170_001
GSMUA_Achr3P01630_001
GSMUA_Achr3P13330_001
GSMUA_Achr3P17860_001
GSMUA_Achr3P21350_001
GSMUA_Achr3P23970_001
GSMUA_Achr3P27250_001
GSMUA_Achr4P00060_001
GSMUA_Achr4P11940_001
GSMUA_Achr4P16010_001
GSMUA_Achr4P17160_001
GSMUA_Achr4P18800_001
GSMUA_Achr4P20370_001
GSMUA_Achr4P30580_001
GSMUA_Achr4P30950_001
GSMUA_Achr5P10770_001
GSMUA_Achr5P12080_001
GSMUA_Achr5P14560_001
GSMUA_Achr5P14800_001
GSMUA_Achr5P18680_001
GSMUA_Achr5P18740_001
GSMUA_Achr5P27000_001
GSMUA_Achr6P05510_001
GSMUA_Achr6P08650_001
GSMUA_Achr6P10560_001
GSMUA_Achr6P15550_001
GSMUA_Achr6P15860_001
GSMUA_Achr6P22460_001
GSMUA_Achr6P23430_001
GSMUA_Achr6P29510_001
GSMUA_Achr6P30810_001
GSMUA_Achr6P34920_001
GSMUA_Achr6P35270_001
GSMUA_Achr7P11640_001
GSMUA_Achr7P15380_001
GSMUA_Achr7P17770_001
GSMUA_Achr7P20890_001
GSMUA_Achr7P22530_001
GSMUA_Achr8P01550_001
GSMUA_Achr8P02690_001
GSMUA_Achr8P10060_001
GSMUA_Achr8P20160_001
GSMUA_Achr8P20970_001
GSMUA_Achr8P30200_001
GSMUA_Achr8P31470_001
GSMUA_Achr9P02630_001
GSMUA_Achr9P03110_001
GSMUA_Achr9P09150_001
GSMUA_Achr9P09350_001
GSMUA_Achr9P23710_001
GSMUA_Achr9P26780_001
GSMUA_Achr9P28760_001
GSMUA_Achr9P28800_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G02195.1 GSMUA_Achr1P26610_001 AT1G02780.1 24556609
AT4G02195.1 GSMUA_Achr7P15380_001 AT1G07820.1 24556609
AT4G02195.1 GSMUA_Achr10P... AT1G25260.1 24556609
AT4G02195.1 GSMUA_Achr4P18800_001 AT1G25260.1 24556609
AT4G02195.1 GSMUA_Achr11P... AT1G27400.1 24556609
AT4G02195.1 GSMUA_Achr4P16010_001 AT1G27400.1 24556609
AT4G02195.1 GSMUA_Achr5P14560_001 AT1G27400.1 24556609
AT4G02195.1 GSMUA_Achr5P18680_001 AT1G27400.1 24556609
AT4G02195.1 GSMUA_Achr10P... AT1G77140.1 10888666
AT4G02195.1 GSMUA_Achr10P... AT1G77140.1 24556609
AT4G02195.1 GSMUA_Achr11P... AT2G18020.1 24556609
AT4G02195.1 GSMUA_Achr11P... AT2G18020.1 24556609
AT4G02195.1 GSMUA_Achr5P18740_001 AT2G18020.1 24556609
AT4G02195.1 GSMUA_Achr9P28800_001 AT2G42740.1 24556609
AT4G02195.1 GSMUA_Achr2P15660_001 AT3G04920.1 24556609
AT4G02195.1 GSMUA_Achr4P30950_001 AT3G04920.1 24556609
AT4G02195.1 GSMUA_Achr6P05510_001 AT3G04920.1 24556609
AT4G02195.1 GSMUA_Achr8P20160_001 AT3G04920.1 24556609
AT4G02195.1 GSMUA_Achr9P28760_001 AT3G04920.1 24556609
AT4G02195.1 GSMUA_AchrUn_... AT3G04920.1 24556609
AT4G02195.1 GSMUA_Achr10P... AT3G12030.1 24556609
AT4G02195.1 GSMUA_Achr11P... AT3G46320.1 24556609
AT4G02195.1 GSMUA_Achr3P13330_001 AT3G48930.1 24556609
AT4G02195.1 GSMUA_Achr4P20370_001 AT3G48930.1 24556609
AT4G02195.1 GSMUA_Achr6P22460_001 AT3G48930.1 24556609
AT4G02195.1 GSMUA_Achr6P35270_001 AT3G48930.1 24556609
AT4G02195.1 GSMUA_Achr7P20890_001 AT3G48930.1 24556609
AT4G02195.1 GSMUA_Achr9P09150_001 AT3G48930.1 24556609
AT4G02195.1 GSMUA_Achr10P... AT3G53730.1 24556609
AT4G02195.1 GSMUA_Achr10P... AT3G53730.1 24556609
AT4G02195.1 GSMUA_Achr1P07160_001 AT3G53730.1 24556609
AT4G02195.1 GSMUA_Achr6P29510_001 AT4G18060.1 24556609
AT4G02195.1 GSMUA_Achr9P02630_001 AT4G18060.1 24556609
AT4G02195.1 GSMUA_Achr1P07620_001 AT4G24190.1 24556609
AT4G02195.1 GSMUA_Achr7P17770_001 AT4G24190.1 24556609
AT4G02195.1 GSMUA_Achr1P00120_001 AT4G28250.1 24556609
AT4G02195.1 GSMUA_Achr5P12080_001 AT4G28250.1 24556609
AT4G02195.1 GSMUA_AchrUn_... AT4G28250.1 24556609
AT4G02195.1 GSMUA_Achr11P... AT5G59690.1 24556609
AT4G02195.1 GSMUA_Achr8P20970_001 AT5G59690.1 24556609
AT4G02195.1 GSMUA_Achr11P... AT5G59970.1 24556609
AT5G26980.1 GSMUA_Achr1P26610_001 AT1G02780.1 24556609
AT5G26980.1 GSMUA_Achr10P... AT1G14320.1 24556609
AT5G26980.1 GSMUA_Achr6P08650_001 AT1G14320.1 24556609
AT5G26980.1 GSMUA_Achr6P15860_001 AT1G14320.1 24556609
AT5G26980.1 GSMUA_Achr8P01550_001 AT1G14320.1 24556609
AT5G26980.1 GSMUA_AchrUn_... AT1G14320.1 24556609
AT5G26980.1 GSMUA_Achr11P... AT1G27400.1 24556609
AT5G26980.1 GSMUA_Achr4P16010_001 AT1G27400.1 24556609
AT5G26980.1 GSMUA_Achr5P14560_001 AT1G27400.1 24556609
AT5G26980.1 GSMUA_Achr5P18680_001 AT1G27400.1 24556609
AT5G26980.1 GSMUA_Achr1P12890_001 AT1G58380.1 24556609
AT5G26980.1 GSMUA_Achr1P22950_001 AT1G58380.1 24556609
AT5G26980.1 GSMUA_Achr2P07800_001 AT1G58380.1 24556609
AT5G26980.1 GSMUA_Achr8P31470_001 AT1G58380.1 24556609
AT5G26980.1 GSMUA_AchrUn_... AT1G58380.1 24556609
AT5G26980.1 GSMUA_Achr10P... AT1G77140.1 10888666
AT5G26980.1 GSMUA_Achr10P... AT1G77140.1 24556609
AT5G26980.1 GSMUA_Achr11P... AT2G17360.1 24556609
AT5G26980.1 GSMUA_Achr2P01640_001 AT2G17360.1 24556609
AT5G26980.1 GSMUA_Achr3P00760_001 AT2G17360.1 24556609
AT5G26980.1 GSMUA_Achr3P23970_001 AT2G17360.1 24556609
AT5G26980.1 GSMUA_Achr5P27000_001 AT2G17360.1 24556609
AT5G26980.1 GSMUA_Achr11P... AT2G18020.1 24556609
AT5G26980.1 GSMUA_Achr11P... AT2G18020.1 24556609
AT5G26980.1 GSMUA_Achr5P18740_001 AT2G18020.1 24556609
AT5G26980.1 GSMUA_Achr10P... AT2G39390.1 24556609
AT5G26980.1 GSMUA_Achr10P... AT2G39390.1 24556609
AT5G26980.1 GSMUA_Achr2P16120_001 AT2G39390.1 24556609
AT5G26980.1 GSMUA_Achr4P30580_001 AT2G39390.1 24556609
AT5G26980.1 GSMUA_Achr8P02690_001 AT2G39390.1 24556609
AT5G26980.1 GSMUA_Achr9P03110_001 AT2G39390.1 24556609
AT5G26980.1 GSMUA_Achr10P... AT2G40510.1 24556609
AT5G26980.1 GSMUA_Achr3P17860_001 AT2G40510.1 24556609
AT5G26980.1 GSMUA_Achr6P15550_001 AT2G40510.1 24556609
AT5G26980.1 GSMUA_Achr6P23430_001 AT2G40510.1 24556609
AT5G26980.1 GSMUA_Achr9P28800_001 AT2G42740.1 24556609
AT5G26980.1 GSMUA_Achr10P... AT3G02080.1 24556609
AT5G26980.1 GSMUA_Achr6P30810_001 AT3G02080.1 24556609
AT5G26980.1 GSMUA_Achr6P34920_001 AT3G02080.1 24556609
AT5G26980.1 GSMUA_Achr9P09350_001 AT3G02080.1 24556609
AT5G26980.1 GSMUA_Achr9P26780_001 AT3G02080.1 24556609
AT5G26980.1 GSMUA_Achr1P21580_001 AT3G04230.1 24556609
AT5G26980.1 GSMUA_Achr2P22080_001 AT3G04230.1 24556609
AT5G26980.1 GSMUA_Achr3P01630_001 AT3G04230.1 24556609
AT5G26980.1 GSMUA_Achr3P21350_001 AT3G04230.1 24556609
AT5G26980.1 GSMUA_Achr6P10560_001 AT3G04230.1 24556609
AT5G26980.1 GSMUA_Achr7P11640_001 AT3G04230.1 24556609
AT5G26980.1 GSMUA_Achr2P15660_001 AT3G04920.1 24556609
AT5G26980.1 GSMUA_Achr4P30950_001 AT3G04920.1 24556609
AT5G26980.1 GSMUA_Achr6P05510_001 AT3G04920.1 24556609
AT5G26980.1 GSMUA_Achr8P20160_001 AT3G04920.1 24556609
AT5G26980.1 GSMUA_Achr9P28760_001 AT3G04920.1 24556609
AT5G26980.1 GSMUA_AchrUn_... AT3G04920.1 24556609
AT5G26980.1 GSMUA_Achr10P... AT3G16460.1 24556609
AT5G26980.1 GSMUA_Achr1P07620_001 AT4G24190.1 24556609
AT5G26980.1 GSMUA_Achr7P17770_001 AT4G24190.1 24556609
AT5G26980.1 GSMUA_Achr10P... AT5G02960.1 24556609
AT5G26980.1 GSMUA_Achr2P22920_001 AT5G02960.1 24556609
AT5G26980.1 GSMUA_Achr2P23030_001 AT5G02960.1 24556609
AT5G26980.1 GSMUA_Achr3P01170_001 AT5G02960.1 24556609
AT5G26980.1 GSMUA_Achr4P17160_001 AT5G02960.1 24556609
AT5G26980.1 GSMUA_Achr5P14800_001 AT5G02960.1 24556609
AT5G26980.1 GSMUA_Achr11P... AT5G13300.1 15743878
AT5G26980.1 GSMUA_Achr4P00060_001 AT5G13300.1 15743878
AT5G26980.1 GSMUA_Achr7P22530_001 AT5G13300.1 15743878
AT5G26980.1 GSMUA_Achr11P... AT5G15200.1 24556609
AT5G26980.1 GSMUA_Achr1P13080_001 AT5G15200.1 24556609
AT5G26980.1 GSMUA_Achr2P06950_001 AT5G15200.1 24556609
AT5G26980.1 GSMUA_Achr8P10060_001 AT5G15200.1 24556609
AT5G26980.1 GSMUA_Achr8P30200_001 AT5G15200.1 24556609
AT5G26980.1 GSMUA_Achr3P27250_001 AT5G28540.1 24556609
AT5G26980.1 GSMUA_Achr4P11940_001 AT5G28540.1 24556609
AT5G26980.1 GSMUA_Achr5P10770_001 AT5G28540.1 24556609
AT5G26980.1 GSMUA_Achr9P23710_001 AT5G28540.1 24556609
AT5G26980.1 GSMUA_Achr10P... AT5G61170.1 24556609
AT5G26980.1 GSMUA_Achr6P30810_001 AT5G61170.1 24556609
AT5G26980.1 GSMUA_Achr6P34920_001 AT5G61170.1 24556609
AT5G26980.1 GSMUA_Achr9P09350_001 AT5G61170.1 24556609
AT5G26980.1 GSMUA_Achr9P26780_001 AT5G61170.1 24556609
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana mitochondrion 88.79 90.15
Zm00001d013996_P003 Maize mitochondrion 76.97 79.38
Zm00001d039404_P001 Maize plasma membrane 77.58 79.26
VIT_14s0060g01540.t01 Wine grape mitochondrion 78.48 79.2
OQU86127 Sorghum mitochondrion 77.88 78.83
TraesCS7D01G044300.1 Wheat cytosol 56.06 77.73
TraesCS7A01G049200.1 Wheat mitochondrion 76.06 76.52
Os06t0116300-01 Rice plasma membrane 76.36 76.36
GSMUA_Achr4P18460_001 Banana mitochondrion 74.85 73.73
Solyc01g100170.2.1 Tomato mitochondrion 71.82 73.15
VIT_07s0005g01000.t01 Wine grape mitochondrion 69.7 72.33
KRG92945 Soybean mitochondrion 70.91 71.78
EER87742 Sorghum mitochondrion 51.21 71.01
AT5G26980.1 Thale cress mitochondrion 69.09 70.81
Bra040527.1-P Field mustard mitochondrion 68.18 70.75
CDY18808 Canola mitochondrion 67.88 70.44
KRH33850 Soybean endoplasmic reticulum 69.39 70.25
CDY05193 Canola mitochondrion 67.27 70.03
Bra039417.1-P Field mustard mitochondrion 66.97 69.72
CDY27747 Canola mitochondrion 66.97 69.72
CDX97432 Canola extracellular, vacuole 5.45 69.23
AT3G05710.2 Thale cress mitochondrion 69.39 69.18
KRG96492 Soybean plastid 67.88 69.14
HORVU7Hr1G008670.5 Barley mitochondrion 75.45 68.78
KRH68233 Soybean plastid 66.67 68.75
TraesCS4A01G435000.1 Wheat mitochondrion 66.36 66.77
Zm00001d045530_P001 Maize cytosol 17.88 65.56
PGSC0003DMT400063615 Potato mitochondrion 72.73 65.4
CDY22037 Canola mitochondrion 62.73 64.29
AT4G02195.1 Thale cress cytosol, mitochondrion, plastid 62.73 64.09
CDY52786 Canola mitochondrion 61.82 63.35
Bra036287.1-P Field mustard cytosol, mitochondrion 54.85 62.85
Solyc09g075530.2.1 Tomato cytosol, mitochondrion 60.0 62.07
HORVU7Hr1G008640.2 Barley mitochondrion 46.97 59.62
PGSC0003DMT400081334 Potato mitochondrion 53.64 55.31
Protein Annotations
Gene3D:1.20.5.110Gene3D:1.20.58.70MapMan:22.7.1.4GO:GO:0003674GO:GO:0005484GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006810GO:GO:0006886
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0016192
GO:GO:0061025EnsemblPlantsGene:GSMUA_Achr10G06360_001EnsemblPlants:GSMUA_Achr10P06360_001EnsemblPlants:GSMUA_Achr10T06360_001InterPro:IPR000727UniProt:M0RFW3
PFAM:PF05739ScanProsite:PS00914PFscan:PS50192PANTHER:PTHR19957PANTHER:PTHR19957:SF83SMART:SM00397
SMART:SM00503InterPro:SNARESUPFAM:SSF47661InterPro:Syntaxin/epimorphin_CSInterPro:Syntaxin_NTMHMM:TMhelix
InterPro:T_SNARE_domUniParc:UPI000295DB8DSEG:seg:::
Description
Syntaxin-43 [Source:GMGC_GENE;Acc:GSMUA_Achr10G06360_001]
Coordinates
chr10:+:16743412..16748358
Molecular Weight (calculated)
36973.3 Da
IEP (calculated)
6.699
GRAVY (calculated)
-0.415
Length
330 amino acids
Sequence
(BLAST)
001: MAMRNRTPIY RKYRDALRNV RVPSPSSHSG PSTSSSYSGS GGGPVIELVN ASLLRPDRSY APLSTEDPGG SSTGAAVVGL PPAWVDVSEE IAADMQRART
101: KMSELVKAHA KALMPSFGDD KEDQHAIKLL TYEITDVLKR SEKRLQKLSS SVPSEDSNVR KNVQRSLATD LQNLSMEFRK KQSSYLKRLQ QQQEGQDGVD
201: LEMNHNGIRH EIEEDDFRDV GFNDIQMSAL KRSEVFTRER EREIVQVVES VNELAQIMKD LSVLVIDQGT IVDRIDYNVQ NVASSVEEGY KQLEKAERTQ
301: RKGGMVMCAT VLVILIFIML VLLILKTILF
Best Arabidopsis Sequence Match ( AT3G05710.2 )
(BLAST)
001: MATRNRTLLF RKYRNSLRSV RAPMGSSSSS TLTEHNSLTG AKSGLGPVIE MASTSLLNPN RSYAPVSTED PGNSSRGTIT VGLPPDWVDV SEEISVYIQR
101: ARTKMAELGK AHAKALMPSF GDGKEDQHQI ETLTQEVTFL LKKSEKQLQR LSAAGPSEDS NVRKNVQRSL ATDLQNLSME LRKKQSTYLK RLRLQKEDGA
201: DLEMNLNGSR YKAEDDDFDD MVFSEHQMSK IKKSEEISIE REKEIQQVVE SVSELAQIMK DLSALVIDQG TIVDRIDYNI QNVASTVDDG LKQLQKAERT
301: QRQGGMVMCA SVLVILCFIM LVLLILKEIL L
Arabidopsis Description
SYP43Syntaxin-43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUJ1]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.