Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- nucleus 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22989 | Soybean | cytosol | 65.64 | 86.99 |
| KRH19753 | Soybean | cytosol | 65.64 | 86.99 |
| KRH10326 | Soybean | endoplasmic reticulum | 65.64 | 86.99 |
| KRH32348 | Soybean | mitochondrion, nucleus | 65.64 | 86.99 |
| Os04t0376000-01 | Rice | cytosol | 65.64 | 86.99 |
| Os02t0503400-01 | Rice | nucleus | 65.03 | 86.18 |
| TraesCS2A01G278600.1 | Wheat | cytosol, unclear | 64.42 | 86.07 |
| TraesCS2B01G296200.1 | Wheat | cytosol, golgi, unclear | 64.42 | 86.07 |
| Bra034070.1-P | Field mustard | cytosol | 64.42 | 85.37 |
| EES05110 | Sorghum | cytosol | 64.42 | 85.37 |
| EES05112 | Sorghum | cytosol | 64.42 | 85.37 |
| Bra029771.1-P | Field mustard | cytosol | 64.42 | 85.37 |
| KRH36218 | Soybean | mitochondrion, nucleus | 64.42 | 85.37 |
| Bra001306.1-P | Field mustard | cytosol | 64.42 | 85.37 |
| KRG92967 | Soybean | cytosol | 64.42 | 85.37 |
| TraesCS2D01G277700.1 | Wheat | cytosol | 63.8 | 85.25 |
| AT3G09500.1 | Thale cress | cytosol | 63.8 | 84.55 |
| PGSC0003DMT400078146 | Potato | cytosol | 63.8 | 84.55 |
| VIT_00s0317g00130.t01 | Wine grape | cytosol | 63.8 | 84.55 |
| Zm00001d025160_P001 | Maize | cytosol | 63.8 | 84.55 |
| Zm00001d016549_P001 | Maize | cytosol, mitochondrion, plasma membrane, plastid | 63.8 | 84.55 |
| AT2G39390.1 | Thale cress | cytosol | 62.58 | 82.93 |
| Solyc05g054810.2.1 | Tomato | cytosol | 62.58 | 82.93 |
| Solyc06g075620.2.1 | Tomato | unclear | 62.58 | 82.93 |
| PGSC0003DMT400077604 | Potato | cytosol | 62.58 | 82.93 |
| PGSC0003DMT400060449 | Potato | cytosol | 62.58 | 82.93 |
| Solyc04g010240.2.1 | Tomato | nucleus, plastid, unclear | 61.96 | 82.11 |
| AT3G55170.1 | Thale cress | cytosol | 61.35 | 81.3 |
| Bra028867.1-P | Field mustard | cytosol | 61.35 | 81.3 |
| Bra009577.1-P | Field mustard | cytosol | 60.74 | 80.49 |
| CDY54380 | Canola | cytosol | 64.42 | 77.78 |
| CDY44711 | Canola | cytosol | 65.64 | 76.98 |
| CDY41605 | Canola | cytosol | 64.42 | 76.64 |
| CDY67681 | Canola | cytosol | 65.03 | 76.26 |
| Zm00001d004349_P001 | Maize | cytosol, plastid | 47.85 | 75.73 |
| Zm00001d053550_P001 | Maize | cytosol | 47.85 | 75.73 |
| HORVU2Hr1G068120.2 | Barley | cytosol | 66.26 | 75.52 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 70.55 | 74.19 |
| GSMUA_Achr4P30580_001 | Banana | cytosol | 69.33 | 73.38 |
| AT5G02610.2 | Thale cress | cytosol | 63.19 | 70.55 |
| CDX73982 | Canola | mitochondrion | 67.48 | 70.51 |
| CDY24964 | Canola | cytosol | 62.58 | 70.34 |
| VIT_06s0004g04020.t01 | Wine grape | cytosol | 63.19 | 69.59 |
| CDY07930 | Canola | extracellular | 65.64 | 68.15 |
| Zm00001d004052_P001 | Maize | cytosol | 64.42 | 67.74 |
| PGSC0003DMT400048945 | Potato | cytosol | 40.49 | 66.0 |
| CDY55408 | Canola | cytosol | 60.74 | 65.56 |
| CDY10436 | Canola | cytosol | 61.35 | 64.1 |
| CDY07652 | Canola | cytosol | 62.58 | 63.75 |
| GSMUA_Achr8P02690_001 | Banana | cytosol | 58.9 | 62.75 |
| CDY04860 | Canola | extracellular | 62.58 | 60.35 |
| GSMUA_Achr2P16120_001 | Banana | cytosol | 72.39 | 59.9 |
| GSMUA_Achr9P03110_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 73.62 | 57.69 |
| CDY68399 | Canola | cytosol | 60.12 | 57.31 |
| CDY07005 | Canola | cytosol | 49.08 | 52.29 |
| Solyc01g010960.1.1 | Tomato | cytosol | 32.52 | 51.96 |
| Bra000131.1-P | Field mustard | cytosol | 61.96 | 49.51 |
| CDX93266 | Canola | mitochondrion | 26.38 | 43.0 |
Protein Annotations
| Gene3D:1.10.20.90 | Gene3D:1.10.287.310 | MapMan:17.1.2.1.35 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| EnsemblPlantsGene:GSMUA_Achr10G03760_001 | EnsemblPlants:GSMUA_Achr10P03760_001 | EnsemblPlants:GSMUA_Achr10T03760_001 | UniProt:M0RF53 | HAMAP:MF_00374 | PFAM:PF00831 |
| PFscan:PS51257 | PANTHER:PTHR13872 | PANTHER:PTHR13872:SF36 | InterPro:Ribosomal_L29/L35 | InterPro:Ribosomal_L29/L35_sf | SUPFAM:SSF46561 |
| TIGRFAMs:TIGR00012 | UniParc:UPI000294F1A1 | SEG:seg | : | : | : |
Description
60S ribosomal protein L35 [Source:GMGC_GENE;Acc:GSMUA_Achr10G03760_001]
Coordinates
chr10:-:12148966..12153841
Molecular Weight (calculated)
19001.8 Da
IEP (calculated)
11.942
GRAVY (calculated)
-0.750
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPIKGLSAY AAVAVWIYGC YLDRAESRTG WRRRRRQPFR MARIKVHELR GKTKAELQNQ LKDLKNELSL LRVAKVTGGA PNKLSKIKVV RLSIARVLTV
101: TSQKQKAALR DAYKKKKLIP LDLRPKKTRA IRRRLTKRQG SLKTERQKKK EMYFPTRKYA IKA
101: TSQKQKAALR DAYKKKKLIP LDLRPKKTRA IRRRLTKRQG SLKTERQKKK EMYFPTRKYA IKA
001: MARIKVHELR EKSKSDLQNQ LKELKAELAL LRVAKVTGGA PNKLSKIKVV RKSIAQVLTV SSQKQKSALR EAYKNKKLLP LDLRPKKTRA IRRRLTKHQA
101: SLKTEREKKK EMYFPIRKYA IKV
101: SLKTEREKKK EMYFPIRKYA IKV
Arabidopsis Description
RPL35A60S ribosomal protein L35-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF53]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.