Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44711 | Canola | cytosol | 96.4 | 96.4 |
| AT3G09500.1 | Thale cress | cytosol | 83.45 | 94.31 |
| CDY54380 | Canola | cytosol | 91.37 | 94.07 |
| CDY41605 | Canola | cytosol | 87.77 | 89.05 |
| TraesCS2D01G277700.1 | Wheat | cytosol | 76.98 | 87.7 |
| KRH19753 | Soybean | cytosol | 76.98 | 86.99 |
| KRH32348 | Soybean | mitochondrion, nucleus | 76.98 | 86.99 |
| TraesCS2B01G296200.1 | Wheat | cytosol, golgi, unclear | 75.54 | 86.07 |
| TraesCS2A01G278600.1 | Wheat | cytosol, unclear | 75.54 | 86.07 |
| EES05110 | Sorghum | cytosol | 75.54 | 85.37 |
| EES05112 | Sorghum | cytosol | 75.54 | 85.37 |
| Zm00001d016549_P001 | Maize | cytosol, mitochondrion, plasma membrane, plastid | 74.1 | 83.74 |
| Zm00001d025160_P001 | Maize | cytosol | 74.1 | 83.74 |
| Os04t0376000-01 | Rice | cytosol | 73.38 | 82.93 |
| Os02t0503400-01 | Rice | nucleus | 72.66 | 82.11 |
| CDX73982 | Canola | mitochondrion | 89.93 | 80.13 |
| CDY07930 | Canola | extracellular | 89.93 | 79.62 |
| CDY24964 | Canola | cytosol | 82.01 | 78.62 |
| Zm00001d004349_P001 | Maize | cytosol, plastid | 55.4 | 74.76 |
| Zm00001d053550_P001 | Maize | cytosol | 55.4 | 74.76 |
| CDY10436 | Canola | cytosol | 83.45 | 74.36 |
| CDY55408 | Canola | cytosol | 80.58 | 74.17 |
| HORVU2Hr1G068120.2 | Barley | cytosol | 76.26 | 74.13 |
| GSMUA_Achr4P30580_001 | Banana | cytosol | 79.86 | 72.08 |
| CDY07652 | Canola | cytosol | 82.73 | 71.88 |
| CDY04860 | Canola | extracellular | 83.45 | 68.64 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 76.26 | 68.39 |
| Zm00001d004052_P001 | Maize | cytosol | 74.82 | 67.1 |
| CDY68399 | Canola | cytosol | 82.01 | 66.67 |
| GSMUA_Achr10P... | Banana | cytosol | 76.26 | 65.03 |
| CDY07005 | Canola | cytosol | 64.03 | 58.17 |
| GSMUA_Achr2P16120_001 | Banana | cytosol | 76.26 | 53.81 |
| GSMUA_Achr8P02690_001 | Banana | cytosol | 58.99 | 53.59 |
| GSMUA_Achr9P03110_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 75.54 | 50.48 |
| CDX93266 | Canola | mitochondrion | 35.97 | 50.0 |
Protein Annotations
| Gene3D:1.10.20.90 | Gene3D:1.10.287.310 | MapMan:17.1.2.1.35 | GO:A0A078JPP0 | UniProt:A0A078JPP0 | EnsemblPlants:CDY67681 |
| ProteinID:CDY67681 | ProteinID:CDY67681.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00065989001 |
| HAMAP:MF_00374 | PFAM:PF00831 | ScanProsite:PS00579 | PANTHER:PTHR13872 | PANTHER:PTHR13872:SF36 | InterPro:Ribosomal_L29/L35 |
| InterPro:Ribosomal_L29/L35_sf | InterPro:Ribosomal_L29_CS | SUPFAM:SSF46561 | TIGRFAMs:TIGR00012 | UniParc:UPI0004EE6130 | : |
Description
BnaC01g44960DBnaC01g44960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JPP0]
Coordinates
chrLK036390:-:135..2082
Molecular Weight (calculated)
16212.4 Da
IEP (calculated)
11.695
GRAVY (calculated)
-0.723
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFTRPIKET RGFKLTMARI KVHELRDKSK SDLQNQLQDL KAELALLRVA KVTGGAPNKL SKIKVVRKSI AQVLTVTSQK QKSALREAYK NKKFIPLDLR
101: PKKTRAIRRR LTKHQLSLKT EREKKKEMYF PIRKYAIKV
101: PKKTRAIRRR LTKHQLSLKT EREKKKEMYF PIRKYAIKV
001: MARIKVHELR EKSKSDLQNQ LKELKAELAL LRVAKVTGGA PNKLSKIKVV RKSIAQVLTV SSQKQKSALR EAYKNKKLLP LDLRPKKTRA IRRRLTKHQA
101: SLKTEREKKK EMYFPIRKYA IKV
101: SLKTEREKKK EMYFPIRKYA IKV
Arabidopsis Description
RPL35A60S ribosomal protein L35-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF53]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.