Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G39390.1 | Thale cress | cytosol | 72.5 | 94.31 |
| AT3G55170.1 | Thale cress | cytosol | 70.0 | 91.06 |
| Solyc06g075620.2.1 | Tomato | unclear | 69.38 | 90.24 |
| Solyc05g054810.2.1 | Tomato | cytosol | 69.38 | 90.24 |
| Solyc04g010240.2.1 | Tomato | nucleus, plastid, unclear | 69.38 | 90.24 |
| PGSC0003DMT400078146 | Potato | cytosol | 69.38 | 90.24 |
| PGSC0003DMT400060449 | Potato | cytosol | 69.38 | 90.24 |
| PGSC0003DMT400077604 | Potato | cytosol | 68.75 | 89.43 |
| CDY24964 | Canola | cytosol | 79.38 | 87.59 |
| VIT_00s0317g00130.t01 | Wine grape | cytosol | 66.88 | 86.99 |
| KRG92967 | Soybean | cytosol | 66.88 | 86.99 |
| KRH36218 | Soybean | mitochondrion, nucleus | 66.88 | 86.99 |
| TraesCS2D01G277700.1 | Wheat | cytosol | 65.0 | 85.25 |
| TraesCS2A01G278600.1 | Wheat | cytosol, unclear | 64.38 | 84.43 |
| EES05110 | Sorghum | cytosol | 64.38 | 83.74 |
| EES05112 | Sorghum | cytosol | 64.38 | 83.74 |
| CDY54380 | Canola | cytosol | 70.62 | 83.7 |
| TraesCS2B01G296200.1 | Wheat | cytosol, golgi, unclear | 63.75 | 83.61 |
| Zm00001d016549_P001 | Maize | cytosol, mitochondrion, plasma membrane, plastid | 63.75 | 82.93 |
| CDY67681 | Canola | cytosol | 71.88 | 82.73 |
| CDY44711 | Canola | cytosol | 71.88 | 82.73 |
| Zm00001d025160_P001 | Maize | cytosol | 63.12 | 82.11 |
| CDY41605 | Canola | cytosol | 70.0 | 81.75 |
| Os04t0376000-01 | Rice | cytosol | 62.5 | 81.3 |
| Os02t0503400-01 | Rice | nucleus | 61.88 | 80.49 |
| CDY55408 | Canola | cytosol | 73.12 | 77.48 |
| CDY10436 | Canola | cytosol | 72.5 | 74.36 |
| Zm00001d053550_P001 | Maize | cytosol | 47.5 | 73.79 |
| Zm00001d004349_P001 | Maize | cytosol, plastid | 47.5 | 73.79 |
| CDX73982 | Canola | mitochondrion | 71.88 | 73.72 |
| HORVU2Hr1G068120.2 | Barley | cytosol | 65.62 | 73.43 |
| VIT_06s0004g04020.t01 | Wine grape | cytosol | 67.5 | 72.97 |
| CDY07930 | Canola | extracellular | 71.25 | 72.61 |
| PGSC0003DMT400048945 | Potato | cytosol | 43.75 | 70.0 |
| CDY04860 | Canola | extracellular | 73.12 | 69.23 |
| GSMUA_Achr4P30580_001 | Banana | cytosol | 66.25 | 68.83 |
| CDY68399 | Canola | cytosol | 73.12 | 68.42 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 64.38 | 66.45 |
| Zm00001d004052_P001 | Maize | cytosol | 64.38 | 66.45 |
| GSMUA_Achr10P... | Banana | cytosol | 63.75 | 62.58 |
| CDY07005 | Canola | cytosol | 58.12 | 60.78 |
| CDX93266 | Canola | mitochondrion | 37.5 | 60.0 |
| Bra000131.1-P | Field mustard | cytosol | 75.0 | 58.82 |
| Solyc01g010960.1.1 | Tomato | cytosol | 35.0 | 54.9 |
| GSMUA_Achr8P02690_001 | Banana | cytosol | 50.62 | 52.94 |
| GSMUA_Achr2P16120_001 | Banana | cytosol | 63.75 | 51.78 |
| GSMUA_Achr9P03110_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 63.75 | 49.04 |
Protein Annotations
| Gene3D:1.10.20.90 | Gene3D:1.10.287.310 | MapMan:17.1.2.1.35 | GO:A0A078F3I8 | UniProt:A0A078F3I8 | EnsemblPlants:CDY07652 |
| ProteinID:CDY07652 | ProteinID:CDY07652.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00124761001 |
| HAMAP:MF_00374 | PFAM:PF00831 | ScanProsite:PS00579 | PANTHER:PTHR13872 | PANTHER:PTHR13872:SF36 | InterPro:Ribosomal_L29/L35 |
| InterPro:Ribosomal_L29/L35_sf | InterPro:Ribosomal_L29_CS | SUPFAM:SSF46561 | TIGRFAMs:TIGR00012 | UniParc:UPI0004EF03E1 | : |
Description
BnaA03g18590DBnaA03g18590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F3I8]
Coordinates
chrLK031980:+:310334..311709
Molecular Weight (calculated)
18602.2 Da
IEP (calculated)
10.985
GRAVY (calculated)
-0.596
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MSICYRCSNR TDCLSKKNVI EPISCYLARE ARELEDAMAR IKVHELREKS KTDLSTQLQD FKADLALLRV AKVTGGAPNK LSKIKVVRKS IAQVLTVISQ
101: KQKLALREAY KNKKFLPLDL RPKKTRAIRR RLTKHQASLK TEREKKKEMY FPIRKYAIKV
101: KQKLALREAY KNKKFLPLDL RPKKTRAIRR RLTKHQASLK TEREKKKEMY FPIRKYAIKV
001: MARIKVHELR EKSKADLSGQ LKEFKAELAL LRVAKVTGGA PNKLSKIKVV RKSIAQVLTV ISQKQKSALR EAYKNKKLLP LDLRPKKTRA IRRRLTKHQA
101: SLKTEREKKK EMYFPIRKYA IKV
101: SLKTEREKKK EMYFPIRKYA IKV
Arabidopsis Description
RPL35B60S ribosomal protein L35-2 [Source:UniProtKB/Swiss-Prot;Acc:O80626]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.