Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034070.1-P | Field mustard | cytosol | 91.11 | 100.0 |
| AT3G09500.1 | Thale cress | cytosol | 85.93 | 94.31 |
| CDY67681 | Canola | cytosol | 94.07 | 91.37 |
| CDY41605 | Canola | cytosol | 91.11 | 89.78 |
| CDY44711 | Canola | cytosol | 91.85 | 89.21 |
| TraesCS2D01G277700.1 | Wheat | cytosol | 79.26 | 87.7 |
| KRH19753 | Soybean | cytosol | 79.26 | 86.99 |
| KRH32348 | Soybean | mitochondrion, nucleus | 79.26 | 86.99 |
| TraesCS2B01G296200.1 | Wheat | cytosol, golgi, unclear | 77.78 | 86.07 |
| TraesCS2A01G278600.1 | Wheat | cytosol, unclear | 77.78 | 86.07 |
| EES05110 | Sorghum | cytosol | 77.78 | 85.37 |
| EES05112 | Sorghum | cytosol | 77.78 | 85.37 |
| Zm00001d025160_P001 | Maize | cytosol | 76.3 | 83.74 |
| Zm00001d016549_P001 | Maize | cytosol, mitochondrion, plasma membrane, plastid | 76.3 | 83.74 |
| Os04t0376000-01 | Rice | cytosol | 75.56 | 82.93 |
| Os02t0503400-01 | Rice | nucleus | 74.81 | 82.11 |
| CDX73982 | Canola | mitochondrion | 91.85 | 79.49 |
| CDY07930 | Canola | extracellular | 91.85 | 78.98 |
| CDY24964 | Canola | cytosol | 82.96 | 77.24 |
| Zm00001d053550_P001 | Maize | cytosol | 57.04 | 74.76 |
| Zm00001d004349_P001 | Maize | cytosol, plastid | 57.04 | 74.76 |
| HORVU2Hr1G068120.2 | Barley | cytosol | 78.52 | 74.13 |
| CDY55408 | Canola | cytosol | 82.22 | 73.51 |
| CDY10436 | Canola | cytosol | 84.44 | 73.08 |
| CDY07652 | Canola | cytosol | 83.7 | 70.62 |
| GSMUA_Achr4P30580_001 | Banana | cytosol | 80.0 | 70.13 |
| CDY04860 | Canola | extracellular | 85.19 | 68.05 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 77.78 | 67.74 |
| Zm00001d004052_P001 | Maize | cytosol | 77.04 | 67.1 |
| CDY68399 | Canola | cytosol | 83.7 | 66.08 |
| GSMUA_Achr10P... | Banana | cytosol | 77.78 | 64.42 |
| CDY07005 | Canola | cytosol | 65.93 | 58.17 |
| GSMUA_Achr8P02690_001 | Banana | cytosol | 60.0 | 52.94 |
| GSMUA_Achr2P16120_001 | Banana | cytosol | 76.3 | 52.28 |
| GSMUA_Achr9P03110_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 77.04 | 50.0 |
| CDX93266 | Canola | mitochondrion | 37.04 | 50.0 |
Protein Annotations
| Gene3D:1.10.20.90 | Gene3D:1.10.287.310 | MapMan:17.1.2.1.35 | GO:A0A078ITA2 | UniProt:A0A078ITA2 | EnsemblPlants:CDY54380 |
| ProteinID:CDY54380 | ProteinID:CDY54380.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00013975001 |
| HAMAP:MF_00374 | PFAM:PF00831 | ScanProsite:PS00579 | PANTHER:PTHR13872 | PANTHER:PTHR13872:SF36 | InterPro:Ribosomal_L29/L35 |
| InterPro:Ribosomal_L29/L35_sf | InterPro:Ribosomal_L29_CS | SUPFAM:SSF46561 | TIGRFAMs:TIGR00012 | UniParc:UPI0004EE5F46 | : |
Description
BnaAnng13110DBnaAnng13110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITA2]
Coordinates
chrLK033311:+:63095..64665
Molecular Weight (calculated)
15795.9 Da
IEP (calculated)
11.533
GRAVY (calculated)
-0.708
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSLKQELFK LTMARIKVHE LRDKSKSDLQ NQLQDLKAEL ALLRVAKVTG GAPNKLSKIK VVRKSIAQVL TVTSQKQKSA LREAYKNKKF IPLDLRPKKT
101: RAIRRRLTKH QLSLKTEREK KKEMYFPIRK YAIKV
101: RAIRRRLTKH QLSLKTEREK KKEMYFPIRK YAIKV
001: MARIKVHELR EKSKSDLQNQ LKELKAELAL LRVAKVTGGA PNKLSKIKVV RKSIAQVLTV SSQKQKSALR EAYKNKKLLP LDLRPKKTRA IRRRLTKHQA
101: SLKTEREKKK EMYFPIRKYA IKV
101: SLKTEREKKK EMYFPIRKYA IKV
Arabidopsis Description
RPL35A60S ribosomal protein L35-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF53]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.