Factsheet for GSMUA_Achr2P16120_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0376000-01	Rice	cytosol	54.82	87.8
TraesCS2A01G278600.1	Wheat	cytosol, unclear	54.31	87.7
TraesCS2B01G296200.1	Wheat	cytosol, golgi, unclear	54.31	87.7
EES05112	Sorghum	cytosol	54.31	86.99
Os02t0503400-01	Rice	nucleus	54.31	86.99
KRH10326	Soybean	endoplasmic reticulum	54.31	86.99
EES05110	Sorghum	cytosol	54.31	86.99
Zm00001d016549_P001	Maize	cytosol, mitochondrion, plasma membrane, plastid	53.81	86.18
KRH19753	Soybean	cytosol	53.81	86.18
KRH22989	Soybean	cytosol	53.81	86.18
KRH32348	Soybean	mitochondrion, nucleus	53.81	86.18
TraesCS2D01G277700.1	Wheat	cytosol	53.3	86.07
Zm00001d025160_P001	Maize	cytosol	53.3	85.37
PGSC0003DMT400078146	Potato	cytosol	52.79	84.55
PGSC0003DMT400077604	Potato	cytosol	52.79	84.55
PGSC0003DMT400060449	Potato	cytosol	52.79	84.55
Solyc05g054810.2.1	Tomato	cytosol	52.79	84.55
VIT_00s0317g00130.t01	Wine grape	cytosol	52.79	84.55
Bra034070.1-P	Field mustard	cytosol	52.28	83.74
Solyc04g010240.2.1	Tomato	nucleus, plastid, unclear	52.28	83.74
Bra029771.1-P	Field mustard	cytosol	52.28	83.74
Bra001306.1-P	Field mustard	cytosol	52.28	83.74
KRG92967	Soybean	cytosol	51.78	82.93
KRH36218	Soybean	mitochondrion, nucleus	51.78	82.93
Solyc06g075620.2.1	Tomato	unclear	51.78	82.93
AT3G09500.1	Thale cress	cytosol	51.78	82.93
AT2G39390.1	Thale cress	cytosol	50.76	81.3
Bra028867.1-P	Field mustard	cytosol	50.25	80.49
Bra009577.1-P	Field mustard	cytosol	50.25	80.49
GSMUA_Achr4P30580_001	Banana	cytosol	62.44	79.87
AT3G55170.1	Thale cress	cytosol	49.75	79.67
GSMUA_Achr10P...	Banana	cytosol, plastid	61.42	78.06
HORVU2Hr1G068120.2	Barley	cytosol	55.84	76.92
CDY41605	Canola	cytosol	53.3	76.64
CDY54380	Canola	cytosol	52.28	76.3
CDY67681	Canola	cytosol	53.81	76.26
Zm00001d004349_P001	Maize	cytosol, plastid	39.59	75.73
Zm00001d053550_P001	Maize	cytosol	39.59	75.73
CDY44711	Canola	cytosol	53.3	75.54
GSMUA_Achr10P...	Banana	cytosol	59.9	72.39
CDY24964	Canola	cytosol	52.28	71.03
AT5G02610.2	Thale cress	cytosol	51.78	69.86
VIT_06s0004g04020.t01	Wine grape	cytosol	52.28	69.59
Zm00001d004052_P001	Maize	cytosol	53.81	68.39
CDY07930	Canola	extracellular	54.31	68.15
CDX73982	Canola	mitochondrion	53.81	67.95
PGSC0003DMT400048945	Potato	cytosol	34.01	67.0
CDY10436	Canola	cytosol	52.28	66.03
CDY55408	Canola	cytosol	50.25	65.56
CDY07652	Canola	cytosol	51.78	63.75
CDY04860	Canola	extracellular	53.3	62.13
GSMUA_Achr8P02690_001	Banana	cytosol	46.7	60.13
CDY68399	Canola	cytosol	50.76	58.48
GSMUA_Achr9P03110_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.42	58.17
CDY07005	Canola	cytosol	42.13	54.25
Solyc01g010960.1.1	Tomato	cytosol	26.9	51.96
Bra000131.1-P	Field mustard	cytosol	51.27	49.51
CDX93266	Canola	mitochondrion	22.34	44.0

Protein Annotations

Gene3D:1.10.20.90	Gene3D:1.10.287.310	MapMan:17.1.2.1.35	ncoils:Coil	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr2G16120_001	EnsemblPlants:GSMUA_Achr2P16120_001	EnsemblPlants:GSMUA_Achr2T16120_001	UniProt:M0S8F3	HAMAP:MF_00374	PFAM:PF00831
PANTHER:PTHR13872	PANTHER:PTHR13872:SF36	InterPro:Ribosomal_L29/L35	InterPro:Ribosomal_L29/L35_sf	SUPFAM:SSF46561	TIGRFAMs:TIGR00012
UniParc:UPI000294F0C3	SEG:seg	:	:	:	:

Description

60S ribosomal protein L35 [Source:GMGC_GENE;Acc:GSMUA_Achr2G16120_001]

Coordinates

chr2:+:17150528..17153491

Molecular Weight (calculated)

22489.3 Da

IEP (calculated)

12.066

GRAVY (calculated)

-0.629

Length

197 amino acids

Sequence
(BLAST)

001: MNYGPLQPTA HGPRTTDHGS TKPLGKLAYV SRVLLAARVL KLLSVYNSRL RLGLGFARGG SGRTRRGRRI DPILMARIKV HELRGKTKGE LQNQLKDLKN
101: ELSLLRVAKV TGGAPNKLSK IKVVRLSIAR VLTVISQTQK AKLREVYKKK KHIPLDLRPK KTRAIRRRLT KHQESLKTER EKKKEMYFPM RKYAIKA

Best Arabidopsis Sequence Match ( AT5G02610.1 )
(BLAST)

001: MARIKVHELR DKSKTDLQNQ LKEFKAELAL LRVAKVTGGA PNKLSKIKVV RKSIAQVLTV ISQKQKSALR EAYKNKKLLP LDLRPKKTRA IRRRLTKHQA
101: SLKTEREKKK EMYFPVRKYA IKV

Arabidopsis Description

Ribosomal L29 family protein [Source:UniProtKB/TrEMBL;Acc:F4KDR2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.