Factsheet for GSMUA_Achr8P02690_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10326	Soybean	endoplasmic reticulum	56.86	70.73
KRH22989	Soybean	cytosol	56.21	69.92
KRH32348	Soybean	mitochondrion, nucleus	56.21	69.92
KRH19753	Soybean	cytosol	55.56	69.11
Zm00001d053550_P001	Maize	cytosol	46.41	68.93
Zm00001d004349_P001	Maize	cytosol, plastid	46.41	68.93
Os04t0376000-01	Rice	cytosol	54.25	67.48
KRG92967	Soybean	cytosol	53.59	66.67
KRH36218	Soybean	mitochondrion, nucleus	53.59	66.67
PGSC0003DMT400078146	Potato	cytosol	53.59	66.67
Solyc06g075620.2.1	Tomato	unclear	53.59	66.67
VIT_00s0317g00130.t01	Wine grape	cytosol	53.59	66.67
TraesCS2A01G278600.1	Wheat	cytosol, unclear	52.94	66.39
TraesCS2B01G296200.1	Wheat	cytosol, golgi, unclear	52.94	66.39
Bra034070.1-P	Field mustard	cytosol	52.94	65.85
Bra029771.1-P	Field mustard	cytosol	52.94	65.85
Os02t0503400-01	Rice	nucleus	52.94	65.85
Bra001306.1-P	Field mustard	cytosol	52.94	65.85
TraesCS2D01G277700.1	Wheat	cytosol	52.29	65.57
Solyc05g054810.2.1	Tomato	cytosol	52.29	65.04
PGSC0003DMT400060449	Potato	cytosol	52.29	65.04
Zm00001d025160_P001	Maize	cytosol	52.29	65.04
EES05110	Sorghum	cytosol	52.29	65.04
EES05112	Sorghum	cytosol	52.29	65.04
PGSC0003DMT400077604	Potato	cytosol	51.63	64.23
Zm00001d016549_P001	Maize	cytosol, mitochondrion, plasma membrane, plastid	51.63	64.23
AT3G09500.1	Thale cress	cytosol	51.63	64.23
AT2G39390.1	Thale cress	cytosol	50.98	63.41
Solyc04g010240.2.1	Tomato	nucleus, plastid, unclear	50.98	63.41
PGSC0003DMT400048945	Potato	cytosol	41.18	63.0
AT3G55170.1	Thale cress	cytosol	50.33	62.6
Bra028867.1-P	Field mustard	cytosol	49.02	60.98
Bra009577.1-P	Field mustard	cytosol	49.02	60.98
CDY54380	Canola	cytosol	52.94	60.0
CDY41605	Canola	cytosol	53.59	59.85
HORVU2Hr1G068120.2	Barley	cytosol	55.56	59.44
CDY44711	Canola	cytosol	53.59	58.99
CDY67681	Canola	cytosol	53.59	58.99
GSMUA_Achr10P...	Banana	cytosol	62.75	58.9
GSMUA_Achr4P30580_001	Banana	cytosol	57.52	57.14
GSMUA_Achr10P...	Banana	cytosol, plastid	56.21	55.48
VIT_06s0004g04020.t01	Wine grape	cytosol	53.59	55.41
CDY24964	Canola	cytosol	52.29	55.17
AT5G02610.2	Thale cress	cytosol	50.98	53.42
CDX73982	Canola	mitochondrion	54.25	53.21
CDY07930	Canola	extracellular	53.59	52.23
CDY55408	Canola	cytosol	50.98	51.66
Zm00001d004052_P001	Maize	cytosol	52.29	51.61
CDY07652	Canola	cytosol	52.94	50.62
Solyc01g010960.1.1	Tomato	cytosol	32.68	49.02
CDY10436	Canola	cytosol	49.67	48.72
GSMUA_Achr2P16120_001	Banana	cytosol	60.13	46.7
GSMUA_Achr9P03110_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.4	46.63
CDX93266	Canola	mitochondrion	30.07	46.0
CDY04860	Canola	extracellular	50.33	45.56
CDY68399	Canola	cytosol	50.33	45.03
Bra000131.1-P	Field mustard	cytosol	50.98	38.24
CDY07005	Canola	cytosol	37.25	37.25

Protein Annotations

Gene3D:1.10.20.90	Gene3D:1.10.287.310	MapMan:17.1.2.1.35	ncoils:Coil	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr8G02690_001	EnsemblPlants:GSMUA_Achr8P02690_001	EnsemblPlants:GSMUA_Achr8T02690_001	UniProt:M0TM21	HAMAP:MF_00374	PFAM:PF00831
PANTHER:PTHR13872	PANTHER:PTHR13872:SF36	InterPro:Ribosomal_L29/L35	InterPro:Ribosomal_L29/L35_sf	SUPFAM:SSF46561	TIGRFAMs:TIGR00012
UniParc:UPI00029539F8	:	:	:	:	:

Description

60S ribosomal protein L35 [Source:GMGC_GENE;Acc:GSMUA_Achr8G02690_001]

Coordinates

chr8:-:1895514..1896960

Molecular Weight (calculated)

17250.4 Da

IEP (calculated)

11.407

GRAVY (calculated)

-0.631

Length

153 amino acids

Sequence
(BLAST)

001: MPNLGPINTI DGGDLPRRRR HPDPMGRIKV HELRGKTKAE LHNQLRDLKN ELSLLRVAKV TGGAPNKLSK IKVVRLSIAR VLTVTSQKQK AALREAYKKK
101: KHIPLDLRPK RTRAIRCPLS KYQVAELDVS TSEAPRLSLC TQARIMSSCP EHQ

Best Arabidopsis Sequence Match ( AT3G09500.1 )
(BLAST)

001: MARIKVHELR EKSKSDLQNQ LKELKAELAL LRVAKVTGGA PNKLSKIKVV RKSIAQVLTV SSQKQKSALR EAYKNKKLLP LDLRPKKTRA IRRRLTKHQA
101: SLKTEREKKK EMYFPIRKYA IKV

Arabidopsis Description

RPL35A60S ribosomal protein L35-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.