CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009577.1-P	Field mustard	cytosol	78.85	100.0
KRH19753	Soybean	cytosol	67.95	86.18
KRH32348	Soybean	mitochondrion, nucleus	67.95	86.18
EES05112	Sorghum	cytosol	67.31	85.37
EES05110	Sorghum	cytosol	67.31	85.37
Zm00001d016549_P001	Maize	cytosol, mitochondrion, plasma membrane, plastid	66.67	84.55
CDY54380	Canola	cytosol	73.08	84.44
Zm00001d025160_P001	Maize	cytosol	66.03	83.74
TraesCS2D01G277700.1	Wheat	cytosol	65.38	83.61
TraesCS2A01G278600.1	Wheat	cytosol, unclear	65.38	83.61
CDY67681	Canola	cytosol	74.36	83.45
CDY41605	Canola	cytosol	73.08	83.21
TraesCS2B01G296200.1	Wheat	cytosol, golgi, unclear	64.74	82.79
CDY44711	Canola	cytosol	73.08	82.01
Os04t0376000-01	Rice	cytosol	64.1	81.3
Os02t0503400-01	Rice	nucleus	63.46	80.49
CDY24964	Canola	cytosol	74.36	80.0
CDY55408	Canola	cytosol	76.92	79.47
AT5G02610.2	Thale cress	cytosol	73.08	78.08
CDY68399	Canola	cytosol	84.62	77.19
CDY04860	Canola	extracellular	82.05	75.74
Zm00001d004349_P001	Maize	cytosol, plastid	50.0	75.73
Zm00001d053550_P001	Maize	cytosol	50.0	75.73
CDX73982	Canola	mitochondrion	73.08	73.08
CDY07652	Canola	cytosol	74.36	72.5
HORVU2Hr1G068120.2	Barley	cytosol	66.03	72.03
CDY07930	Canola	extracellular	71.79	71.34
GSMUA_Achr4P30580_001	Banana	cytosol	67.31	68.18
GSMUA_Achr10P...	Banana	cytosol, plastid	67.31	67.74
Zm00001d004052_P001	Maize	cytosol	67.31	67.74
GSMUA_Achr10P...	Banana	cytosol	64.1	61.35
CDY07005	Canola	cytosol	58.33	59.48
CDX93266	Canola	mitochondrion	36.54	57.0
GSMUA_Achr2P16120_001	Banana	cytosol	66.03	52.28
GSMUA_Achr8P02690_001	Banana	cytosol	48.72	49.67
GSMUA_Achr9P03110_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.03	49.52

Protein Annotations

Gene3D:1.10.20.90	Gene3D:1.10.287.310	MapMan:17.1.2.1.35	GO:A0A078FAJ2	UniProt:A0A078FAJ2	EnsemblPlants:CDY10436
ProteinID:CDY10436	ProteinID:CDY10436.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00032356001
HAMAP:MF_00374	PFAM:PF00831	ScanProsite:PS00579	PANTHER:PTHR13872	PANTHER:PTHR13872:SF36	InterPro:Ribosomal_L29/L35
InterPro:Ribosomal_L29/L35_sf	InterPro:Ribosomal_L29_CS	SUPFAM:SSF46561	TIGRFAMs:TIGR00012	UniParc:UPI0004EE4492	:

Description

BnaCnng03370DBnaCnng03370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAJ2]

Coordinates

chrLK032003:-:489109..490847

Molecular Weight (calculated)

17999.5 Da

IEP (calculated)

11.500

GRAVY (calculated)

-0.574

Length

156 amino acids

Sequence
(BLAST)

001: MMANSFKKQS IVVGFATVGA RNEEAEFNTS KLTMARIKVH ELRERSKTDL QSQLQEFKAE LALLRVAKVT GGAPNKLSKI KVVRKSIAQV LTVISQKQKL
101: ALREAYKSKK FLPLDLRPKK TRAIRRRLTK HQSSLKTERE KKKEMYFPLR KYAIKV

Best Arabidopsis Sequence Match ( AT2G39390.1 )
(BLAST)

001: MARIKVHELR EKSKADLSGQ LKEFKAELAL LRVAKVTGGA PNKLSKIKVV RKSIAQVLTV ISQKQKSALR EAYKNKKLLP LDLRPKKTRA IRRRLTKHQA
101: SLKTEREKKK EMYFPIRKYA IKV

Arabidopsis Description

RPL35B60S ribosomal protein L35-2 [Source:UniProtKB/Swiss-Prot;Acc:O80626]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.