Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 4
- peroxisome 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 54.05 | 35.24 |
| VIT_12s0034g01000.t01 | Wine grape | nucleus | 54.05 | 34.93 |
| KRH10455 | Soybean | nucleus | 53.38 | 34.5 |
| KRH43991 | Soybean | endoplasmic reticulum | 52.03 | 33.62 |
| EES09085 | Sorghum | mitochondrion | 50.0 | 32.03 |
| KXG22766 | Sorghum | mitochondrion | 50.0 | 32.03 |
| Solyc01g104470.2.1 | Tomato | nucleus | 49.32 | 31.88 |
| PGSC0003DMT400061021 | Potato | nucleus | 49.32 | 31.88 |
| Os11t0105400-01 | Rice | nucleus | 49.32 | 31.33 |
| TraesCS5D01G158600.1 | Wheat | nucleus | 48.65 | 30.77 |
| TraesCS5B01G152500.1 | Wheat | nucleus | 48.65 | 30.77 |
| TraesCS5A01G153300.1 | Wheat | nucleus | 48.65 | 30.77 |
| Bra010982.1-P | Field mustard | nucleus | 47.3 | 30.57 |
| CDY64691 | Canola | nucleus | 47.3 | 30.57 |
| CDY36122 | Canola | nucleus | 47.3 | 30.57 |
| Bra024770.1-P | Field mustard | nucleus | 47.3 | 30.57 |
| Bra012490.1-P | Field mustard | nucleus | 47.3 | 30.57 |
| Zm00001d005089_P005 | Maize | mitochondrion | 48.65 | 30.25 |
| Os12t0105200-00 | Rice | cytosol, nucleus | 48.65 | 30.0 |
| HORVU5Hr1G047980.5 | Barley | cytosol, nucleus | 47.3 | 29.91 |
| Zm00001d044615_P001 | Maize | nucleus | 50.0 | 29.72 |
| AT1G25260.1 | Thale cress | nucleus | 43.24 | 27.23 |
| Zm00001d003202_P002 | Maize | cytosol | 32.43 | 23.76 |
| CDY51987 | Canola | cytosol, nucleus, plastid | 47.3 | 23.33 |
| CDY18189 | Canola | cytosol | 18.24 | 20.3 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P18800_001 | EnsemblPlants:GSMUA_Achr4T18800_001 | EnsemblPlantsGene:GSMUA_Achr4G18800_001 | Gene3D:3.90.105.20 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR21141 | PANTHER:PTHR21141:SF37 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000296DA48 |
| UniProt:M0SQ43 | MapMan:17.1.2.2.2.6 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G18800_001]
Coordinates
chr4:+:19825615..19828810
Molecular Weight (calculated)
17236.1 Da
IEP (calculated)
7.809
GRAVY (calculated)
-0.129
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MRNQRLKEFR ERLKSTSRFF LGYIFILYNS EIVLFKEVFL CRVFQEYDFA RTVNVATEKV ELKEGPLEQF THEMEPYLRK QGLPVRLKKG VIGLVSDLAV
101: CEQGMPLSSE SARNLLTCLI LDSDSHCLSS HLAKYHQQLF PEQLCCLP
101: CEQGMPLSSE SARNLLTCLI LDSDSHCLSS HLAKYHQQLF PEQLCCLP
001: MPKSKRDRPV TLSKTKKKGR EHKECIVNGI REAVEKYSSV YVFSFENMRN IKFKEFRQQF RHNGKFFLGS NKVMQVALGR SAEDELRSGI YKVSKLLRGD
101: TGLLVTDMPK EEVESLFNAY EDSDFSRTGS IAVETVELKE GPLEQFTHEM EPLLRKLEMP VRLNKGTVEL VADFVVCEEG KQLSPKSAHI LRLLRMKMAT
201: FKLNLLCRWS PSDFELYRED LSELYREDLS DVETS
101: TGLLVTDMPK EEVESLFNAY EDSDFSRTGS IAVETVELKE GPLEQFTHEM EPLLRKLEMP VRLNKGTVEL VADFVVCEEG KQLSPKSAHI LRLLRMKMAT
201: FKLNLLCRWS PSDFELYRED LSELYREDLS DVETS
Arabidopsis Description
Ribosome assembly factor mrt4 [Source:UniProtKB/TrEMBL;Acc:Q94AK8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.