Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- mitochondrion 5
- golgi 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc01g010540.2.1 | |
| Solyc01g010580.2.1 | |
| Solyc01g010960.1.1 | |
| Solyc01g068530.2.1 | |
| Solyc01g097870.2.1 | |
| Solyc02g070320.2.1 | |
| Solyc02g070330.2.1 | |
| Solyc02g070340.2.1 | |
| Solyc02g070350.2.1 | |
| Solyc02g070360.2.1 | |
| Solyc02g086240.2.1 | |
| Solyc03g111230.2.1 | |
| Solyc03g115360.2.1 | |
| Solyc03g115760.2.1 | |
| Solyc04g005680.2.1 | |
| Solyc04g008810.2.1 | |
| Solyc04g010240.2.1 | |
| Solyc04g016350.1.1 | |
| Solyc04g026100.1.1 | |
| Solyc04g063290.2.1 | |
| Solyc04g064820.2.1 | |
| Solyc04g074300.2.1 | |
| Solyc04g080150.1.1 | |
| Solyc04g081570.2.1 | |
| Solyc05g005690.1.1 | |
| Solyc05g007250.2.1 | |
| Solyc05g054810.2.1 | |
| Solyc06g005110.2.1 | |
| Solyc06g007360.2.1 | |
| Solyc06g007470.2.1 | |
| Solyc06g007520.2.1 | |
| Solyc06g011510.1.1 | |
| Solyc06g052050.2.1 | |
| Solyc06g071870.2.1 | |
| Solyc06g071880.2.1 | |
| Solyc06g075620.2.1 | |
| Solyc06g082650.2.1 | |
| Solyc06g082670.2.1 | |
| Solyc06g084230.2.1 | |
| Solyc07g055230.2.1 | |
| Solyc07g063890.2.1 | |
| Solyc09g007350.2.1 | |
| Solyc09g031760.1.1 | |
| Solyc09g065330.2.1 | |
| Solyc10g006580.2.1 | |
| Solyc10g007980.2.1 | |
| Solyc10g084310.1.1 | |
| Solyc10g086020.1.1 | |
| Solyc11g013160.1.1 | |
| Solyc12g005330.1.1 | |
| Solyc12g010930.1.1 | |
| Solyc12g039120.1.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G26980.1 | Solyc09g031760.1.1 | AT1G02780.1 | 24556609 |
| AT5G26980.1 | Solyc06g007520.2.1 | AT1G14320.1 | 24556609 |
| AT5G26980.1 | Solyc06g082650.2.1 | AT1G14320.1 | 24556609 |
| AT5G26980.1 | Solyc06g082670.2.1 | AT1G14320.1 | 24556609 |
| AT5G26980.1 | Solyc03g111230.2.1 | AT1G27400.1 | 24556609 |
| AT5G26980.1 | Solyc06g071870.2.1 | AT1G27400.1 | 24556609 |
| AT5G26980.1 | Solyc06g071880.2.1 | AT1G27400.1 | 24556609 |
| AT5G26980.1 | Solyc04g063290.2.1 | AT1G58380.1 | 24556609 |
| AT5G26980.1 | Solyc04g074300.2.1 | AT1G58380.1 | 24556609 |
| AT5G26980.1 | Solyc04g064820.2.1 | AT1G77140.1 | 10888666 |
| AT5G26980.1 | Solyc04g064820.2.1 | AT1G77140.1 | 24556609 |
| AT5G26980.1 | Solyc02g070320.2.1 | AT2G17360.1 | 24556609 |
| AT5G26980.1 | Solyc02g070330.2.1 | AT2G17360.1 | 24556609 |
| AT5G26980.1 | Solyc02g070340.2.1 | AT2G17360.1 | 24556609 |
| AT5G26980.1 | Solyc02g070350.2.1 | AT2G17360.1 | 24556609 |
| AT5G26980.1 | Solyc02g070360.2.1 | AT2G17360.1 | 24556609 |
| AT5G26980.1 | Solyc04g016350.1.1 | AT2G17360.1 | 24556609 |
| AT5G26980.1 | Solyc06g007360.2.1 | AT2G17360.1 | 24556609 |
| AT5G26980.1 | Solyc07g063890.2.1 | AT2G18020.1 | 24556609 |
| AT5G26980.1 | Solyc10g006580.2.1 | AT2G18020.1 | 24556609 |
| AT5G26980.1 | Solyc12g005330.1.1 | AT2G18020.1 | 24556609 |
| AT5G26980.1 | Solyc01g010960.1.1 | AT2G39390.1 | 24556609 |
| AT5G26980.1 | Solyc04g010240.2.1 | AT2G39390.1 | 24556609 |
| AT5G26980.1 | Solyc05g054810.2.1 | AT2G39390.1 | 24556609 |
| AT5G26980.1 | Solyc06g075620.2.1 | AT2G39390.1 | 24556609 |
| AT5G26980.1 | Solyc04g008810.2.1 | AT2G40510.1 | 24556609 |
| AT5G26980.1 | Solyc06g007470.2.1 | AT2G40510.1 | 24556609 |
| AT5G26980.1 | Solyc02g086240.2.1 | AT2G42740.1 | 24556609 |
| AT5G26980.1 | Solyc04g080150.1.1 | AT2G42740.1 | 24556609 |
| AT5G26980.1 | Solyc07g055230.2.1 | AT2G42740.1 | 24556609 |
| AT5G26980.1 | Solyc10g007980.2.1 | AT2G42740.1 | 24556609 |
| AT5G26980.1 | Solyc12g010930.1.1 | AT2G42740.1 | 24556609 |
| AT5G26980.1 | Solyc03g115360.2.1 | AT3G02080.1 | 24556609 |
| AT5G26980.1 | Solyc12g039120.1.1 | AT3G02080.1 | 24556609 |
| AT5G26980.1 | Solyc01g068530.2.1 | AT3G04230.1 | 24556609 |
| AT5G26980.1 | Solyc04g026100.1.1 | AT3G04230.1 | 24556609 |
| AT5G26980.1 | Solyc05g005690.1.1 | AT3G04230.1 | 24556609 |
| AT5G26980.1 | Solyc01g097870.2.1 | AT3G04920.1 | 24556609 |
| AT5G26980.1 | Solyc06g084230.2.1 | AT3G04920.1 | 24556609 |
| AT5G26980.1 | Solyc09g065330.2.1 | AT3G04920.1 | 24556609 |
| AT5G26980.1 | Solyc04g081570.2.1 | AT4G24190.1 | 24556609 |
| AT5G26980.1 | Solyc06g005110.2.1 | AT5G02960.1 | 24556609 |
| AT5G26980.1 | Solyc06g011510.1.1 | AT5G02960.1 | 24556609 |
| AT5G26980.1 | Solyc09g007350.2.1 | AT5G02960.1 | 24556609 |
| AT5G26980.1 | Solyc10g084310.1.1 | AT5G02960.1 | 24556609 |
| AT5G26980.1 | Solyc10g086020.1.1 | AT5G02960.1 | 24556609 |
| AT5G26980.1 | Solyc11g013160.1.1 | AT5G02960.1 | 24556609 |
| AT5G26980.1 | Solyc01g010540.2.1 | AT5G15200.1 | 24556609 |
| AT5G26980.1 | Solyc01g010580.2.1 | AT5G15200.1 | 24556609 |
| AT5G26980.1 | Solyc04g005680.2.1 | AT5G15200.1 | 24556609 |
| AT5G26980.1 | Solyc05g007250.2.1 | AT5G15200.1 | 24556609 |
| AT5G26980.1 | Solyc06g052050.2.1 | AT5G28540.1 | 24556609 |
| AT5G26980.1 | Solyc03g115760.2.1 | AT5G39510.1 | 10888666 |
| AT5G26980.1 | Solyc03g115360.2.1 | AT5G61170.1 | 24556609 |
| AT5G26980.1 | Solyc12g039120.1.1 | AT5G61170.1 | 24556609 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400063615 | Potato | mitochondrion | 98.46 | 86.92 |
| KRG92945 | Soybean | mitochondrion | 81.79 | 81.29 |
| KRH33850 | Soybean | endoplasmic reticulum | 80.25 | 79.75 |
| VIT_14s0060g01540.t01 | Wine grape | mitochondrion | 79.94 | 79.2 |
| CDY05193 | Canola | mitochondrion | 75.0 | 76.66 |
| Bra040527.1-P | Field mustard | mitochondrion | 75.0 | 76.42 |
| CDY18808 | Canola | mitochondrion | 74.69 | 76.1 |
| Bra039417.1-P | Field mustard | mitochondrion | 74.38 | 76.03 |
| CDY27747 | Canola | mitochondrion | 74.38 | 76.03 |
| AT5G26980.1 | Thale cress | mitochondrion | 75.0 | 75.47 |
| TraesCS7D01G044300.1 | Wheat | cytosol | 54.94 | 74.79 |
| Zm00001d013996_P003 | Maize | mitochondrion | 73.77 | 74.69 |
| AT3G05710.2 | Thale cress | mitochondrion | 75.93 | 74.32 |
| OQU86127 | Sorghum | mitochondrion | 74.69 | 74.23 |
| Zm00001d039404_P001 | Maize | plasma membrane | 73.46 | 73.68 |
| Os06t0116300-01 | Rice | plasma membrane | 75.0 | 73.64 |
| GSMUA_Achr11P... | Banana | mitochondrion | 72.84 | 72.62 |
| TraesCS7A01G049200.1 | Wheat | mitochondrion | 73.46 | 72.56 |
| GSMUA_Achr10P... | Banana | mitochondrion | 73.15 | 71.82 |
| GSMUA_Achr4P18460_001 | Banana | mitochondrion | 71.3 | 68.96 |
| HORVU7Hr1G008670.5 | Barley | mitochondrion | 73.15 | 65.47 |
| Solyc09g075530.2.1 | Tomato | cytosol, mitochondrion | 63.27 | 64.26 |
| EER87742 | Sorghum | mitochondrion | 46.91 | 63.87 |
| TraesCS4A01G435000.1 | Wheat | mitochondrion | 64.51 | 63.72 |
| Zm00001d045530_P001 | Maize | cytosol | 17.28 | 62.22 |
| HORVU7Hr1G008640.2 | Barley | mitochondrion | 45.68 | 56.92 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | MapMan:22.7.1.4 | GO:GO:0000149 | GO:GO:0003674 | GO:GO:0005484 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006906 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0012505 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0031201 | GO:GO:0048278 |
| InterPro:IPR000727 | UniProt:K4B151 | PFAM:PF05739 | ScanProsite:PS00914 | PFscan:PS50192 | PANTHER:PTHR19957 |
| PANTHER:PTHR19957:SF83 | SMART:SM00397 | SMART:SM00503 | InterPro:SNARE | SUPFAM:SSF47661 | EnsemblPlantsGene:Solyc01g100170.2 |
| EnsemblPlants:Solyc01g100170.2.1 | InterPro:Syntaxin/epimorphin_CS | InterPro:Syntaxin_N | TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI0002767506 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:90235486..90240434
Molecular Weight (calculated)
36063.3 Da
IEP (calculated)
8.690
GRAVY (calculated)
-0.444
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRNRTLVF RKYRDALRSV RIPAGSSTST SSGHGSGPVI ELATTSLLNP NRSYAPLSTE DPGTSSNGPV TVGLPPAWVD LSDEITANVH RVRTKMSELA
101: KAHAKALMPS FGDGKEDQRR IEALTHEITD LLKRSEKKLQ RLSAAGLSED SNVRKNVQRS LATDLQSLSM ELRRKQSTYL KRLQQQKEGP DGVDLEMNLN
201: GSHSRRDDDD LDDLGFNEHQ MAKLKKSEAF TVEREREIQQ VVESVNDLAQ IMKDLSVLVI DQGTIVDRID HNIQNVASTV EDGLKQLKKA ERSQKRGGMV
301: MCATVLVIMC FIMLVLLILK EIIF
101: KAHAKALMPS FGDGKEDQRR IEALTHEITD LLKRSEKKLQ RLSAAGLSED SNVRKNVQRS LATDLQSLSM ELRRKQSTYL KRLQQQKEGP DGVDLEMNLN
201: GSHSRRDDDD LDDLGFNEHQ MAKLKKSEAF TVEREREIQQ VVESVNDLAQ IMKDLSVLVI DQGTIVDRID HNIQNVASTV EDGLKQLKKA ERSQKRGGMV
301: MCATVLVIMC FIMLVLLILK EIIF
001: MATRNRTLLF RKYRNSLRSV RAPMGSSSSS TLTEHNSLTG AKSGLGPVIE MASTSLLNPN RSYAPVSTED PGNSSRGTIT VGLPPDWVDV SEEISVYIQR
101: ARTKMAELGK AHAKALMPSF GDGKEDQHQI ETLTQEVTFL LKKSEKQLQR LSAAGPSEDS NVRKNVQRSL ATDLQNLSME LRKKQSTYLK RLRLQKEDGA
201: DLEMNLNGSR YKAEDDDFDD MVFSEHQMSK IKKSEEISIE REKEIQQVVE SVSELAQIMK DLSALVIDQG TIVDRIDYNI QNVASTVDDG LKQLQKAERT
301: QRQGGMVMCA SVLVILCFIM LVLLILKEIL L
101: ARTKMAELGK AHAKALMPSF GDGKEDQHQI ETLTQEVTFL LKKSEKQLQR LSAAGPSEDS NVRKNVQRSL ATDLQNLSME LRKKQSTYLK RLRLQKEDGA
201: DLEMNLNGSR YKAEDDDFDD MVFSEHQMSK IKKSEEISIE REKEIQQVVE SVSELAQIMK DLSALVIDQG TIVDRIDYNI QNVASTVDDG LKQLQKAERT
301: QRQGGMVMCA SVLVILCFIM LVLLILKEIL L
Arabidopsis Description
SYP43Syntaxin-43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUJ1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.