Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05193 | Canola | mitochondrion | 85.8 | 89.59 |
| Bra039417.1-P | Field mustard | mitochondrion | 85.2 | 88.96 |
| CDY27747 | Canola | mitochondrion | 85.2 | 88.96 |
| Bra040527.1-P | Field mustard | mitochondrion | 84.59 | 88.05 |
| CDY18808 | Canola | mitochondrion | 84.29 | 87.74 |
| AT5G26980.1 | Thale cress | mitochondrion | 84.29 | 86.65 |
| KRG92945 | Soybean | mitochondrion | 76.13 | 77.3 |
| KRH33850 | Soybean | endoplasmic reticulum | 75.83 | 76.99 |
| VIT_14s0060g01540.t01 | Wine grape | mitochondrion | 75.53 | 76.45 |
| Solyc01g100170.2.1 | Tomato | mitochondrion | 74.32 | 75.93 |
| Zm00001d039404_P001 | Maize | plasma membrane | 71.3 | 73.06 |
| OQU86127 | Sorghum | mitochondrion | 71.9 | 73.01 |
| Zm00001d013996_P003 | Maize | mitochondrion | 69.79 | 72.19 |
| Os06t0116300-01 | Rice | plasma membrane | 71.6 | 71.82 |
| TraesCS7D01G044300.1 | Wheat | cytosol | 51.06 | 71.01 |
| GSMUA_Achr11P... | Banana | mitochondrion | 68.88 | 70.15 |
| TraesCS7A01G049200.1 | Wheat | mitochondrion | 69.49 | 70.12 |
| GSMUA_Achr10P... | Banana | mitochondrion | 69.18 | 69.39 |
| GSMUA_Achr4P18460_001 | Banana | mitochondrion | 69.79 | 68.96 |
| PGSC0003DMT400063615 | Potato | mitochondrion | 75.53 | 68.12 |
| HORVU7Hr1G008670.5 | Barley | mitochondrion | 68.58 | 62.71 |
| EER87742 | Sorghum | mitochondrion | 44.41 | 61.76 |
| AT4G02195.1 | Thale cress | cytosol, mitochondrion, plastid | 60.12 | 61.61 |
| TraesCS4A01G435000.1 | Wheat | mitochondrion | 61.03 | 61.59 |
| Zm00001d045530_P001 | Maize | cytosol | 16.62 | 61.11 |
| HORVU7Hr1G008640.2 | Barley | mitochondrion | 43.2 | 55.0 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | MapMan:22.7.1.4 | EntrezGene:819740 | ProteinID:AAF26126.1 | ProteinID:AEE74282.1 |
| ProteinID:AEE74283.1 | EMBL:AJ245408 | ArrayExpress:AT3G05710 | EnsemblPlantsGene:AT3G05710 | RefSeq:AT3G05710 | TAIR:AT3G05710 |
| RefSeq:AT3G05710-TAIR-G | EnsemblPlants:AT3G05710.2 | TAIR:AT3G05710.2 | EMBL:AY088000 | EMBL:AY099723 | EMBL:AY128886 |
| Unigene:At.20438 | GO:GO:0000149 | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 |
| GO:GO:0005802 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006906 | GO:GO:0007030 | GO:GO:0007034 |
| GO:GO:0008150 | GO:GO:0009306 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016192 | GO:GO:0031201 | GO:GO:0048278 | GO:GO:0061025 | InterPro:IPR000727 |
| RefSeq:NP_566256.1 | RefSeq:NP_850519.1 | PFAM:PF05739 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | ScanProsite:PS00914 | PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF83 | UniProt:Q9SUJ1 |
| SMART:SM00397 | SMART:SM00503 | InterPro:SNARE | SUPFAM:SSF47661 | Symbol:SYP43 | InterPro:Syntaxin/epimorphin_CS |
| InterPro:Syntaxin_N | TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI000016D8D5 | SEG:seg | : |
Description
SYP43Syntaxin-43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUJ1]
Coordinates
chr3:+:1685003..1687558
Molecular Weight (calculated)
36983.4 Da
IEP (calculated)
6.958
GRAVY (calculated)
-0.424
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRNRTLLF RKYRNSLRSV RAPMGSSSSS TLTEHNSLTG AKSGLGPVIE MASTSLLNPN RSYAPVSTED PGNSSRGTIT VGLPPDWVDV SEEISVYIQR
101: ARTKMAELGK AHAKALMPSF GDGKEDQHQI ETLTQEVTFL LKKSEKQLQR LSAAGPSEDS NVRKNVQRSL ATDLQNLSME LRKKQSTYLK RLRLQKEDGA
201: DLEMNLNGSR YKAEDDDFDD MVFSEHQMSK IKKSEEISIE REKEIQQVVE SVSELAQIMK DLSALVIDQG TIVDRIDYNI QNVASTVDDG LKQLQKAERT
301: QRQGGMVMCA SVLVILCFIM LVLLILKEIL L
101: ARTKMAELGK AHAKALMPSF GDGKEDQHQI ETLTQEVTFL LKKSEKQLQR LSAAGPSEDS NVRKNVQRSL ATDLQNLSME LRKKQSTYLK RLRLQKEDGA
201: DLEMNLNGSR YKAEDDDFDD MVFSEHQMSK IKKSEEISIE REKEIQQVVE SVSELAQIMK DLSALVIDQG TIVDRIDYNI QNVASTVDDG LKQLQKAERT
301: QRQGGMVMCA SVLVILCFIM LVLLILKEIL L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.