Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 1
- mitochondrion 6
- golgi 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
GSMUA_Achr10P... | |
GSMUA_Achr10P... | |
GSMUA_Achr10P... | |
GSMUA_Achr10P... | |
GSMUA_Achr10P... | |
GSMUA_Achr10P... | |
GSMUA_Achr10P... | |
GSMUA_Achr10P... | |
GSMUA_Achr10P... | |
GSMUA_Achr10P... | |
GSMUA_Achr10P... | |
GSMUA_Achr10P... | |
GSMUA_Achr11P... | |
GSMUA_Achr11P... | |
GSMUA_Achr11P... | |
GSMUA_Achr11P... | |
GSMUA_Achr11P... | |
GSMUA_Achr11P... | |
GSMUA_Achr11P... | |
GSMUA_Achr11P... | |
GSMUA_Achr1P00120_001 | |
GSMUA_Achr1P07160_001 | |
GSMUA_Achr1P07620_001 | |
GSMUA_Achr1P12890_001 | |
GSMUA_Achr1P13080_001 | |
GSMUA_Achr1P21580_001 | |
GSMUA_Achr1P22950_001 | |
GSMUA_Achr1P26610_001 | |
GSMUA_Achr2P01640_001 | |
GSMUA_Achr2P06950_001 | |
GSMUA_Achr2P07800_001 | |
GSMUA_Achr2P15660_001 | |
GSMUA_Achr2P16120_001 | |
GSMUA_Achr2P22080_001 | |
GSMUA_Achr2P22920_001 | |
GSMUA_Achr2P23030_001 | |
GSMUA_Achr3P00760_001 | |
GSMUA_Achr3P01170_001 | |
GSMUA_Achr3P01630_001 | |
GSMUA_Achr3P13330_001 | |
GSMUA_Achr3P17860_001 | |
GSMUA_Achr3P21350_001 | |
GSMUA_Achr3P23970_001 | |
GSMUA_Achr3P27250_001 | |
GSMUA_Achr4P00060_001 | |
GSMUA_Achr4P11940_001 | |
GSMUA_Achr4P16010_001 | |
GSMUA_Achr4P17160_001 | |
GSMUA_Achr4P18800_001 | |
GSMUA_Achr4P20370_001 | |
GSMUA_Achr4P30580_001 | |
GSMUA_Achr4P30950_001 | |
GSMUA_Achr5P10770_001 | |
GSMUA_Achr5P12080_001 | |
GSMUA_Achr5P14560_001 | |
GSMUA_Achr5P14800_001 | |
GSMUA_Achr5P18680_001 | |
GSMUA_Achr5P18740_001 | |
GSMUA_Achr5P27000_001 | |
GSMUA_Achr6P05510_001 | |
GSMUA_Achr6P08650_001 | |
GSMUA_Achr6P10560_001 | |
GSMUA_Achr6P15550_001 | |
GSMUA_Achr6P15860_001 | |
GSMUA_Achr6P22460_001 | |
GSMUA_Achr6P23430_001 | |
GSMUA_Achr6P29510_001 | |
GSMUA_Achr6P30810_001 | |
GSMUA_Achr6P34920_001 | |
GSMUA_Achr6P35270_001 | |
GSMUA_Achr7P11640_001 | |
GSMUA_Achr7P15380_001 | |
GSMUA_Achr7P17770_001 | |
GSMUA_Achr7P20890_001 | |
GSMUA_Achr7P22530_001 | |
GSMUA_Achr8P01550_001 | |
GSMUA_Achr8P02690_001 | |
GSMUA_Achr8P10060_001 | |
GSMUA_Achr8P20160_001 | |
GSMUA_Achr8P20970_001 | |
GSMUA_Achr8P30200_001 | |
GSMUA_Achr8P31470_001 | |
GSMUA_Achr9P02630_001 | |
GSMUA_Achr9P03110_001 | |
GSMUA_Achr9P09150_001 | |
GSMUA_Achr9P09350_001 | |
GSMUA_Achr9P23710_001 | |
GSMUA_Achr9P26780_001 | |
GSMUA_Achr9P28760_001 | |
GSMUA_Achr9P28800_001 | |
GSMUA_AchrUn_... | |
GSMUA_AchrUn_... | |
GSMUA_AchrUn_... | |
GSMUA_AchrUn_... |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT4G02195.1 | GSMUA_Achr1P26610_001 | AT1G02780.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr7P15380_001 | AT1G07820.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr10P... | AT1G25260.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr4P18800_001 | AT1G25260.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr11P... | AT1G27400.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr4P16010_001 | AT1G27400.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr5P14560_001 | AT1G27400.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr5P18680_001 | AT1G27400.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr10P... | AT1G77140.1 | 10888666 |
AT4G02195.1 | GSMUA_Achr10P... | AT1G77140.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr11P... | AT2G18020.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr11P... | AT2G18020.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr5P18740_001 | AT2G18020.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr9P28800_001 | AT2G42740.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr2P15660_001 | AT3G04920.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr4P30950_001 | AT3G04920.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr6P05510_001 | AT3G04920.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr8P20160_001 | AT3G04920.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr9P28760_001 | AT3G04920.1 | 24556609 |
AT4G02195.1 | GSMUA_AchrUn_... | AT3G04920.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr10P... | AT3G12030.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr11P... | AT3G46320.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr3P13330_001 | AT3G48930.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr4P20370_001 | AT3G48930.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr6P22460_001 | AT3G48930.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr6P35270_001 | AT3G48930.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr7P20890_001 | AT3G48930.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr9P09150_001 | AT3G48930.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr10P... | AT3G53730.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr10P... | AT3G53730.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr1P07160_001 | AT3G53730.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr6P29510_001 | AT4G18060.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr9P02630_001 | AT4G18060.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr1P07620_001 | AT4G24190.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr7P17770_001 | AT4G24190.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr1P00120_001 | AT4G28250.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr5P12080_001 | AT4G28250.1 | 24556609 |
AT4G02195.1 | GSMUA_AchrUn_... | AT4G28250.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr11P... | AT5G59690.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr8P20970_001 | AT5G59690.1 | 24556609 |
AT4G02195.1 | GSMUA_Achr11P... | AT5G59970.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr1P26610_001 | AT1G02780.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr10P... | AT1G14320.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr6P08650_001 | AT1G14320.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr6P15860_001 | AT1G14320.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr8P01550_001 | AT1G14320.1 | 24556609 |
AT5G26980.1 | GSMUA_AchrUn_... | AT1G14320.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr11P... | AT1G27400.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr4P16010_001 | AT1G27400.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr5P14560_001 | AT1G27400.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr5P18680_001 | AT1G27400.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr1P12890_001 | AT1G58380.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr1P22950_001 | AT1G58380.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr2P07800_001 | AT1G58380.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr8P31470_001 | AT1G58380.1 | 24556609 |
AT5G26980.1 | GSMUA_AchrUn_... | AT1G58380.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr10P... | AT1G77140.1 | 10888666 |
AT5G26980.1 | GSMUA_Achr10P... | AT1G77140.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr11P... | AT2G17360.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr2P01640_001 | AT2G17360.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr3P00760_001 | AT2G17360.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr3P23970_001 | AT2G17360.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr5P27000_001 | AT2G17360.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr11P... | AT2G18020.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr11P... | AT2G18020.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr5P18740_001 | AT2G18020.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr10P... | AT2G39390.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr10P... | AT2G39390.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr2P16120_001 | AT2G39390.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr4P30580_001 | AT2G39390.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr8P02690_001 | AT2G39390.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr9P03110_001 | AT2G39390.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr10P... | AT2G40510.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr3P17860_001 | AT2G40510.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr6P15550_001 | AT2G40510.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr6P23430_001 | AT2G40510.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr9P28800_001 | AT2G42740.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr10P... | AT3G02080.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr6P30810_001 | AT3G02080.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr6P34920_001 | AT3G02080.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr9P09350_001 | AT3G02080.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr9P26780_001 | AT3G02080.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr1P21580_001 | AT3G04230.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr2P22080_001 | AT3G04230.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr3P01630_001 | AT3G04230.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr3P21350_001 | AT3G04230.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr6P10560_001 | AT3G04230.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr7P11640_001 | AT3G04230.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr2P15660_001 | AT3G04920.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr4P30950_001 | AT3G04920.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr6P05510_001 | AT3G04920.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr8P20160_001 | AT3G04920.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr9P28760_001 | AT3G04920.1 | 24556609 |
AT5G26980.1 | GSMUA_AchrUn_... | AT3G04920.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr10P... | AT3G16460.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr1P07620_001 | AT4G24190.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr7P17770_001 | AT4G24190.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr10P... | AT5G02960.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr2P22920_001 | AT5G02960.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr2P23030_001 | AT5G02960.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr3P01170_001 | AT5G02960.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr4P17160_001 | AT5G02960.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr5P14800_001 | AT5G02960.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr11P... | AT5G13300.1 | 15743878 |
AT5G26980.1 | GSMUA_Achr4P00060_001 | AT5G13300.1 | 15743878 |
AT5G26980.1 | GSMUA_Achr7P22530_001 | AT5G13300.1 | 15743878 |
AT5G26980.1 | GSMUA_Achr11P... | AT5G15200.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr1P13080_001 | AT5G15200.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr2P06950_001 | AT5G15200.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr8P10060_001 | AT5G15200.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr8P30200_001 | AT5G15200.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr3P27250_001 | AT5G28540.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr4P11940_001 | AT5G28540.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr5P10770_001 | AT5G28540.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr9P23710_001 | AT5G28540.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr10P... | AT5G61170.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr6P30810_001 | AT5G61170.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr6P34920_001 | AT5G61170.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr9P09350_001 | AT5G61170.1 | 24556609 |
AT5G26980.1 | GSMUA_Achr9P26780_001 | AT5G61170.1 | 24556609 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_14s0060g01540.t01 | Wine grape | mitochondrion | 76.72 | 78.59 |
GSMUA_Achr11P... | Banana | mitochondrion | 74.03 | 76.31 |
GSMUA_Achr10P... | Banana | mitochondrion | 73.73 | 74.85 |
KRG92945 | Soybean | mitochondrion | 72.84 | 74.85 |
KRH33850 | Soybean | endoplasmic reticulum | 71.34 | 73.31 |
Bra040527.1-P | Field mustard | mitochondrion | 69.25 | 72.96 |
CDY18808 | Canola | mitochondrion | 68.96 | 72.64 |
VIT_07s0005g01000.t01 | Wine grape | mitochondrion | 68.06 | 71.7 |
Solyc01g100170.2.1 | Tomato | mitochondrion | 68.96 | 71.3 |
CDY05193 | Canola | mitochondrion | 67.46 | 71.29 |
Bra039417.1-P | Field mustard | mitochondrion | 66.87 | 70.66 |
CDY27747 | Canola | mitochondrion | 66.87 | 70.66 |
AT3G05710.2 | Thale cress | mitochondrion | 68.96 | 69.79 |
AT5G26980.1 | Thale cress | mitochondrion | 66.87 | 69.57 |
KRG96492 | Soybean | plastid | 65.97 | 68.21 |
KRH68233 | Soybean | plastid | 64.78 | 67.81 |
CDY52786 | Canola | mitochondrion | 62.09 | 64.6 |
CDY22037 | Canola | mitochondrion | 62.09 | 64.6 |
Bra036287.1-P | Field mustard | cytosol, mitochondrion | 54.93 | 63.89 |
PGSC0003DMT400063615 | Potato | mitochondrion | 69.55 | 63.49 |
Solyc09g075530.2.1 | Tomato | cytosol, mitochondrion | 59.4 | 62.38 |
AT4G02195.1 | Thale cress | cytosol, mitochondrion, plastid | 60.0 | 62.23 |
CDX97432 | Canola | extracellular, vacuole | 4.78 | 61.54 |
PGSC0003DMT400081334 | Potato | mitochondrion | 52.54 | 55.0 |
Protein Annotations
Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | MapMan:22.7.1.4 | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006886 |
GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016192 |
GO:GO:0061025 | EnsemblPlantsGene:GSMUA_Achr4G18460_001 | EnsemblPlants:GSMUA_Achr4P18460_001 | EnsemblPlants:GSMUA_Achr4T18460_001 | InterPro:IPR000727 | UniProt:M0SQ09 |
PFAM:PF05739 | ScanProsite:PS00914 | PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF83 | SMART:SM00397 |
SMART:SM00503 | InterPro:SNARE | SUPFAM:SSF47661 | InterPro:Syntaxin/epimorphin_CS | InterPro:Syntaxin_N | TMHMM:TMhelix |
InterPro:T_SNARE_dom | UniParc:UPI0002967494 | SEG:seg | : | : | : |
Description
Syntaxin-43 [Source:GMGC_GENE;Acc:GSMUA_Achr4G18460_001]
Coordinates
chr4:+:19325973..19331339
Molecular Weight (calculated)
37682.5 Da
IEP (calculated)
8.222
GRAVY (calculated)
-0.392
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTRNRTPLY KKYRDALRSV RVPMASFSPS HAGPSSSVSS SSSAGRGGPV IEMVSTSLLH PNRSYAPVST EDPGNSSRGH IMVGLPPAWV DLSEEISANM
101: QRARTKISEL VKVHEKALMP SFGDGKEDQL AIEVLTHEIT DLLKRSEKRL MKLSPSGPSE ESNVRRNVQR SLATDLQNLS MQLRKKQSIY LKRLREQKEG
201: QDGLDFDMNI NGTMSNMEDD VFVDVGFSEH QMSQLKRNEA FTREREREIA QVVESVNELA QIMKDLSVLV IDQGTIIDRI EYNIQNVAST VEEGYKQLQK
301: AERTQRKGGM VMCATILVIM CFVMLVLLVL KEIFF
101: QRARTKISEL VKVHEKALMP SFGDGKEDQL AIEVLTHEIT DLLKRSEKRL MKLSPSGPSE ESNVRRNVQR SLATDLQNLS MQLRKKQSIY LKRLREQKEG
201: QDGLDFDMNI NGTMSNMEDD VFVDVGFSEH QMSQLKRNEA FTREREREIA QVVESVNELA QIMKDLSVLV IDQGTIIDRI EYNIQNVAST VEEGYKQLQK
301: AERTQRKGGM VMCATILVIM CFVMLVLLVL KEIFF
001: MATRNRTLLF RKYRNSLRSV RAPMGSSSSS TLTEHNSLTG AKSGLGPVIE MASTSLLNPN RSYAPVSTED PGNSSRGTIT VGLPPDWVDV SEEISVYIQR
101: ARTKMAELGK AHAKALMPSF GDGKEDQHQI ETLTQEVTFL LKKSEKQLQR LSAAGPSEDS NVRKNVQRSL ATDLQNLSME LRKKQSTYLK RLRLQKEDGA
201: DLEMNLNGSR YKAEDDDFDD MVFSEHQMSK IKKSEEISIE REKEIQQVVE SVSELAQIMK DLSALVIDQG TIVDRIDYNI QNVASTVDDG LKQLQKAERT
301: QRQGGMVMCA SVLVILCFIM LVLLILKEIL L
101: ARTKMAELGK AHAKALMPSF GDGKEDQHQI ETLTQEVTFL LKKSEKQLQR LSAAGPSEDS NVRKNVQRSL ATDLQNLSME LRKKQSTYLK RLRLQKEDGA
201: DLEMNLNGSR YKAEDDDFDD MVFSEHQMSK IKKSEEISIE REKEIQQVVE SVSELAQIMK DLSALVIDQG TIVDRIDYNI QNVASTVDDG LKQLQKAERT
301: QRQGGMVMCA SVLVILCFIM LVLLILKEIL L
Arabidopsis Description
SYP43Syntaxin-43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUJ1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.