Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
- mitochondrion 4
- golgi 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRG89385 | |
| KRG92744 | |
| KRG94771 | |
| KRG96400 | |
| KRG96473 | |
| KRG96941 | |
| KRG97436 | |
| KRH03569 | |
| KRH04214 | |
| KRH04217 | |
| KRH05964 | |
| KRH06758 | |
| KRH08094 | |
| KRH08587 | |
| KRH08728 | |
| KRH09419 | |
| KRH09430 | |
| KRH10345 | |
| KRH10455 | |
| KRH12095 | |
| KRH13277 | |
| KRH16362 | |
| KRH17444 | |
| KRH20240 | |
| KRH22402 | |
| KRH24981 | |
| KRH25552 | |
| KRH25819 | |
| KRH25821 | |
| KRH26935 | |
| KRH28784 | |
| KRH30347 | |
| KRH31467 | |
| KRH31847 | |
| KRH31849 | |
| KRH32592 | |
| KRH34063 | |
| KRH37857 | |
| KRH37858 | |
| KRH42661 | |
| KRH42945 | |
| KRH43991 | |
| KRH46963 | |
| KRH53395 | |
| KRH53793 | |
| KRH55687 | |
| KRH55704 | |
| KRH55988 | |
| KRH56320 | |
| KRH56423 | |
| KRH58763 | |
| KRH59070 | |
| KRH62493 | |
| KRH62765 | |
| KRH64028 | |
| KRH64151 | |
| KRH64544 | |
| KRH68137 | |
| KRH68219 | |
| KRH68706 | |
| KRH69268 | |
| KRH69269 | |
| KRH69797 | |
| KRH75732 | |
| KRH76216 | |
| KRH76671 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G02195.1 | KRG96400 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRG96473 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRH31847 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRH31849 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRH68137 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRH68219 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRH69268 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRH69269 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRH76216 | AT1G02780.1 | 24556609 |
| AT4G02195.1 | KRH32592 | AT1G07660.1 | 24556609 |
| AT4G02195.1 | KRH10455 | AT1G25260.1 | 24556609 |
| AT4G02195.1 | KRH43991 | AT1G25260.1 | 24556609 |
| AT4G02195.1 | KRG97436 | AT1G27400.1 | 24556609 |
| AT4G02195.1 | KRH08728 | AT1G27400.1 | 24556609 |
| AT4G02195.1 | KRH31467 | AT1G27400.1 | 24556609 |
| AT4G02195.1 | KRH42661 | AT1G27400.1 | 24556609 |
| AT4G02195.1 | KRH58763 | AT1G27400.1 | 24556609 |
| AT4G02195.1 | KRG89385 | AT1G72900.1 | 24556609 |
| AT4G02195.1 | KRH08587 | AT1G72900.1 | 24556609 |
| AT4G02195.1 | KRH09419 | AT1G72900.1 | 24556609 |
| AT4G02195.1 | KRH09430 | AT1G72900.1 | 24556609 |
| AT4G02195.1 | KRH53793 | AT1G72900.1 | 24556609 |
| AT4G02195.1 | KRH64151 | AT1G72900.1 | 24556609 |
| AT4G02195.1 | KRH53395 | AT1G77140.1 | 10888666 |
| AT4G02195.1 | KRH64544 | AT1G77140.1 | 10888666 |
| AT4G02195.1 | KRH53395 | AT1G77140.1 | 24556609 |
| AT4G02195.1 | KRH64544 | AT1G77140.1 | 24556609 |
| AT4G02195.1 | KRH08094 | AT2G18020.1 | 24556609 |
| AT4G02195.1 | KRH28784 | AT2G18020.1 | 24556609 |
| AT4G02195.1 | KRH69797 | AT2G18020.1 | 24556609 |
| AT4G02195.1 | KRH76671 | AT2G18020.1 | 24556609 |
| AT4G02195.1 | KRH12095 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH13277 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH16362 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH25819 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH25821 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH55687 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH55704 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH56320 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH56423 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH62493 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRH62765 | AT2G42740.1 | 24556609 |
| AT4G02195.1 | KRG92744 | AT3G04920.1 | 24556609 |
| AT4G02195.1 | KRG96941 | AT3G04920.1 | 24556609 |
| AT4G02195.1 | KRH04214 | AT3G04920.1 | 24556609 |
| AT4G02195.1 | KRH04217 | AT3G04920.1 | 24556609 |
| AT4G02195.1 | KRH34063 | AT3G04920.1 | 24556609 |
| AT4G02195.1 | KRH64028 | AT3G04920.1 | 24556609 |
| AT4G02195.1 | KRH68706 | AT3G04920.1 | 24556609 |
| AT4G02195.1 | KRG94771 | AT3G12030.1 | 24556609 |
| AT4G02195.1 | KRH06758 | AT3G12030.1 | 24556609 |
| AT4G02195.1 | KRH46963 | AT3G12030.1 | 24556609 |
| AT4G02195.1 | KRH30347 | AT3G45930.1 | 24556609 |
| AT4G02195.1 | KRH03569 | AT3G48930.1 | 24556609 |
| AT4G02195.1 | KRH20240 | AT3G48930.1 | 24556609 |
| AT4G02195.1 | KRH37857 | AT3G48930.1 | 24556609 |
| AT4G02195.1 | KRH37858 | AT3G48930.1 | 24556609 |
| AT4G02195.1 | KRH75732 | AT3G48930.1 | 24556609 |
| AT4G02195.1 | KRH10345 | AT3G53730.1 | 24556609 |
| AT4G02195.1 | KRH24981 | AT3G53730.1 | 24556609 |
| AT4G02195.1 | KRH42945 | AT4G18060.1 | 24556609 |
| AT4G02195.1 | KRH59070 | AT4G18060.1 | 24556609 |
| AT4G02195.1 | KRH05964 | AT4G24190.1 | 24556609 |
| AT4G02195.1 | KRH17444 | AT4G24190.1 | 24556609 |
| AT4G02195.1 | KRH22402 | AT4G28250.1 | 24556609 |
| AT4G02195.1 | KRH25552 | AT4G28250.1 | 24556609 |
| AT4G02195.1 | KRH26935 | AT4G28250.1 | 24556609 |
| AT4G02195.1 | KRH55988 | AT4G28250.1 | 24556609 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG96492 | Soybean | plastid | 95.0 | 93.83 |
| VIT_07s0005g01000.t01 | Wine grape | mitochondrion | 72.81 | 73.27 |
| KRH33850 | Soybean | endoplasmic reticulum | 72.19 | 70.86 |
| KRG92945 | Soybean | mitochondrion | 71.56 | 70.25 |
| TraesCS7D01G044300.1 | Wheat | cytosol | 52.19 | 70.17 |
| Zm00001d039404_P001 | Maize | plasma membrane | 70.62 | 69.97 |
| Os06t0116300-01 | Rice | plasma membrane | 71.56 | 69.39 |
| Zm00001d013996_P003 | Maize | mitochondrion | 69.38 | 69.38 |
| OQU86127 | Sorghum | mitochondrion | 70.62 | 69.33 |
| GSMUA_Achr11P... | Banana | mitochondrion | 68.44 | 67.38 |
| TraesCS7A01G049200.1 | Wheat | mitochondrion | 69.06 | 67.38 |
| CDY22037 | Canola | mitochondrion | 67.5 | 67.08 |
| Bra036287.1-P | Field mustard | cytosol, mitochondrion | 60.0 | 66.67 |
| GSMUA_Achr10P... | Banana | mitochondrion | 68.75 | 66.67 |
| Solyc09g075530.2.1 | Tomato | cytosol, mitochondrion | 65.94 | 66.14 |
| AT4G02195.1 | Thale cress | cytosol, mitochondrion, plastid | 66.56 | 65.94 |
| CDY52786 | Canola | mitochondrion | 65.94 | 65.53 |
| GSMUA_Achr4P18460_001 | Banana | mitochondrion | 67.81 | 64.78 |
| EER87742 | Sorghum | mitochondrion | 46.88 | 63.03 |
| CDX97432 | Canola | extracellular, vacuole | 5.0 | 61.54 |
| HORVU7Hr1G008670.5 | Barley | mitochondrion | 68.44 | 60.5 |
| TraesCS4A01G435000.1 | Wheat | mitochondrion | 61.56 | 60.06 |
| PGSC0003DMT400081334 | Potato | mitochondrion | 60.0 | 60.0 |
| Zm00001d045530_P001 | Maize | cytosol | 16.25 | 57.78 |
| HORVU7Hr1G008640.2 | Barley | mitochondrion | 43.44 | 53.46 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | EntrezGene:100797056 | MapMan:22.7.1.4 | EMBL:ACUP02002104 | EnsemblPlantsGene:GLYMA_03G217400 |
| GO:GO:0000149 | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006906 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0012505 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0016192 | GO:GO:0031201 | GO:GO:0048278 | UniProt:I1JQP7 | InterPro:IPR000727 | EnsemblPlants:KRH68233 |
| ProteinID:KRH68233 | ProteinID:KRH68233.1 | PFAM:PF05739 | ScanProsite:PS00914 | PFscan:PS50192 | PANTHER:PTHR19957 |
| PANTHER:PTHR19957:SF83 | SMART:SM00397 | SMART:SM00503 | InterPro:SNARE | SUPFAM:SSF47661 | InterPro:Syntaxin/epimorphin_CS |
| InterPro:Syntaxin_N | TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI0002339BF3 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:+:42132996..42136707
Molecular Weight (calculated)
36087.1 Da
IEP (calculated)
7.277
GRAVY (calculated)
-0.461
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRNRTLEF RKHRDAVKSV RAPLSSSASS PVIEMVTTSL LPSNRSSYAP LSTQEHAPST SRDAFTVGLP PSWVDDSEEI ATNIQRARVR ISELTKAHAK
101: ALMPSFGDGK EDQRHIETLT QEITSLLRKS EVRLKRLSAA AGSSEDSNVR KNVQRSHATD LQNLSMDLRR KQSAYLKHLQ QQQEGYDGVD LEMNFNGSKF
201: VSHNDEFSDV GFSEEQMTKL KRSEQFSEER EREIEQVVKS VHELAQIMKD LSVLVIDQGT IVDRIDYNIQ SVSTSVEEGL KQLQKAERIQ KKGGMVMCAS
301: TLVIMCFVML VLLILKEILF
101: ALMPSFGDGK EDQRHIETLT QEITSLLRKS EVRLKRLSAA AGSSEDSNVR KNVQRSHATD LQNLSMDLRR KQSAYLKHLQ QQQEGYDGVD LEMNFNGSKF
201: VSHNDEFSDV GFSEEQMTKL KRSEQFSEER EREIEQVVKS VHELAQIMKD LSVLVIDQGT IVDRIDYNIQ SVSTSVEEGL KQLQKAERIQ KKGGMVMCAS
301: TLVIMCFVML VLLILKEILF
001: MATRNRTLLF RKYRNSLRSV RAPMGSSSSS TLTEHNSLTG AKSGLGPVIE MASTSLLNPN RSYAPVSTED PGNSRGTITV GLPPDWVDVS EEISVYIQRA
101: RTKMAELGKA HAKALMPSFG DGKEDQHQIE TLTQEVTFLL KKSEKQLQRL SAAGPSEDSN VRKNVQRSLA TDLQNLSMEL RKKQSTYLKR LRLQKEDGAD
201: LEMNLNGSRY KAEDDDFDDM VFSEHQMSKI KKSEEISIER EKEIQQVVES VSELAQIMKD LSALVIDQGT IVDRIDYNIQ NVASTVDDGL KQLQKAERTQ
301: RQGGMVMCAS VLVILCFIML VLLILKEILL
101: RTKMAELGKA HAKALMPSFG DGKEDQHQIE TLTQEVTFLL KKSEKQLQRL SAAGPSEDSN VRKNVQRSLA TDLQNLSMEL RKKQSTYLKR LRLQKEDGAD
201: LEMNLNGSRY KAEDDDFDDM VFSEHQMSKI KKSEEISIER EKEIQQVVES VSELAQIMKD LSALVIDQGT IVDRIDYNIQ NVASTVDDGL KQLQKAERTQ
301: RQGGMVMCAS VLVILCFIML VLLILKEILL
Arabidopsis Description
SYP43Syntaxin-43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUJ1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.