CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53793	Soybean	cytosol	61.22	59.01
KRH09430	Soybean	cytosol	17.29	54.41
Solyc02g032250.1.1	Tomato	cytosol	14.49	43.66
KRH08587	Soybean	cytosol	53.74	42.28
KRH09419	Soybean	cytosol, plasma membrane, plastid	13.08	36.36
VIT_05s0051g00300.t01	Wine grape	plastid	16.82	32.43
AT1G72930.1	Thale cress	cytosol	24.3	29.55
CDX96441	Canola	cytosol	29.91	28.7
KRH64151	Soybean	cytosol	58.88	27.16
CDY59925	Canola	cytosol	30.84	26.83
AT1G72920.1	Thale cress	cytosol	31.78	24.73
CDY11138	Canola	cytosol, plastid	29.91	24.15
CDX72959	Canola	cytosol	35.51	19.95
CDX96440	Canola	cytosol	34.58	19.68
AT1G17615.1	Thale cress	cytosol, plastid	33.64	18.95
AT1G72950.1	Thale cress	cytosol	33.18	18.73
AT1G72900.1	Thale cress	cytosol	31.78	18.73
Bra016028.1-P	Field mustard	cytosol	32.71	18.52
CDX96438	Canola	cytosol	32.71	18.52
CDY11140	Canola	mitochondrion	37.38	18.52
Bra025962.1-P	Field mustard	cytosol	33.18	18.39
CDY48315	Canola	cytosol	33.18	18.39
CDY26232	Canola	cytosol	33.18	18.39
Bra003864.1-P	Field mustard	mitochondrion	36.45	18.14
CDY67955	Canola	mitochondrion	36.45	18.1
AT1G72940.1	Thale cress	cytosol	30.84	17.79
Bra016029.1-P	Field mustard	plastid	35.05	17.61
AT1G72910.1	Thale cress	cytosol	30.37	17.11
CDY11139	Canola	plastid	30.84	16.79
CDX72958	Canola	plastid	34.11	16.78
Bra008060.1-P	Field mustard	plastid	35.51	16.74
CDX72960	Canola	plastid	33.64	16.4
CDY48026	Canola	mitochondrion	35.51	16.34
CDX96439	Canola	mitochondrion, plastid	30.37	16.05
AT1G72890.2	Thale cress	mitochondrion, plastid	36.45	16.02
Bra016027.1-P	Field mustard	plastid	30.37	15.89
CDX72961	Canola	cytosol, plastid	34.58	12.89
CDX96437	Canola	golgi, mitochondrion	12.62	8.85
CDY16898	Canola	plastid	21.5	8.36
Bra016026.1-P	Field mustard	cytosol	34.58	6.49
CDX68251	Canola	cytosol, plastid	30.84	5.55
Bra003863.1-P	Field mustard	cytosol, plastid	30.84	5.5
CDX96442	Canola	cytosol	12.15	3.29

Protein Annotations

Gene3D:3.40.50.10140	MapMan:35.1	UniProt:A0A0R0E5K4	EMBL:ACUP02012206	EnsemblPlantsGene:GLYMA_20G020500	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
InterPro:IPR000157	InterPro:IPR035897	EnsemblPlants:KRG89385	ProteinID:KRG89385	ProteinID:KRG89385.1	PFAM:PF01582
PFscan:PS50104	PANTHER:PTHR11017	PANTHER:PTHR11017:SF198	SMART:SM00255	SUPFAM:SSF52200	InterPro:TIR_dom
InterPro:Toll_tir_struct_dom_sf	UniParc:UPI0006ED7E82	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:2112225..2113935

Molecular Weight (calculated)

24233.0 Da

IEP (calculated)

7.033

GRAVY (calculated)

-0.429

Length

214 amino acids

Sequence
(BLAST)

001: MALRSSSDAF TNDVFLSFRG SDTRLGFFGN LYKALSDRGI HTFIDHEKLK RGEEITPTLV NAIQESKITI IMNLQPILDC ANGKKGLLVL PGFHNMDPSD
101: VRRWKGSYGE ALAKHEERFK FNHNMEKLQQ WKMGLYQVAN LSGYHFKDGA GYEYEFIGKI VERVSSKINH ATLYVADHPV GLESQVLEVR KLLDDRSDDG
201: VQMIGIHRMG GPDD

Best Arabidopsis Sequence Match ( AT5G36930.2 )
(BLAST)

0001: MLGMAQGRER IPERWTYDVF VSFRGADVRK NFLSHLYDSL RRCGISTFMD DVELQRGEYI SPELLNAIET SKILIVVLTK DYASSAWCLD ELVHIMKSHK
0101: NNPSHMVFPI FLYVDPSDIR WQQGSYAKSF SKHKNSHPLN KLKDWREALT KVANISGWDI KNRNEAECIA DITREILKRL PCQYLHVPSY AVGLRSRLQH
0201: ISSLLSIGSD GVRVIVIYGM GGIGKTTLAK VAFNEFSHLF EGSSFLENFR EYSKKPEGRT HLQHQLLSDI LRRNDIEFKG LDHAVKERFR SKRVLLVVDD
0301: VDDVHQLNSA AIDRDCFGHG SRIIITTRNM HLLKQLRAEG SYSPKELDGD ESLELFSWHA FRTSEPPKEF LQHSEEVVTY CAGLPLAVEV LGAFLIERSI
0401: REWESTLKLL KRIPNDNIQA KLQISFNALT IEQKDVFLDI ACFFIGVDSY YVACILDGCN LYPDIVLSLL MERCLITISG NNIMMHDLLR DMGRQIVREI
0501: SPKKCGERSR LWSHNDVVGV LKKKSGTNAI EGLSLKADVM DFQYFEVEAF AKMQELRLLE LRYVDLNGSY EHFPKDLRWL CWHGFSLECF PINLSLESLA
0601: ALDLQYSNLK RFWKAQSPPQ PANMVKYLDL SHSVYLRETP DFSYFPNVEK LILINCKSLV LVHKSIGILD KKLVLLNLSS CIELDVLPEE IYKLKSLESL
0701: FLSNCSKLER LDDALGELES LTTLLADFTA LREIPSTINQ LKKLKRLSLN GCKGLLSDDI DNLYSEKSHS VSLLRPVSLS GLTYMRILSL GYCNLSDELI
0801: PEDIGSLSFL RDLDLRGNSF CNLPTDFATL PNLGELLLSD CSKLQSILSL PRSLLFLDVG KCIMLKRTPD ISKCSALFKL QLNDCISLFE IPGIHNHEYL
0901: SFIVLDGCKL ASTDTTINTM LENWLKRNHE CIYIPVDRPN VIPNWVYFEE EKRSFSITVP ETDNSDTVVG FTLWMNFVCP MGYSSIYPRA IIVRNLTRGS
1001: AWIHSLKNSK IRIQMNANLL TNDFHIVTGD EIEVDVDCDD RFTILATGIA LCYKARDSSD FSFGDIKFTY EEDDLGYASN GIYLDCHRSK YGHDSLQAVV
1101: HWKISYPMDG ETSNLFACSF FPGISRYQEN NQPVVDVEES NHRPRRKMRM SLWKILGAIG FLTLVVVLEV YFELLSSIFA NSTTDYIMLP T

Arabidopsis Description

Disease resistance protein (TIR-NBS-LRR class) family [Source:UniProtKB/TrEMBL;Acc:B3H776]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.