Factsheet for AT1G72910.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G72930.1	Thale cress	cytosol	42.37	91.48
AT1G72900.1	Thale cress	cytosol	66.58	69.7
AT1G72940.1	Thale cress	cytosol	63.95	65.5
AT1G72920.1	Thale cress	cytosol	44.74	61.82
AT1G72950.1	Thale cress	cytosol	60.53	60.69
CDX96440	Canola	cytosol	57.89	58.51
CDX72959	Canola	cytosol	57.11	56.96
Bra016028.1-P	Field mustard	cytosol	55.53	55.82
CDX96438	Canola	cytosol	55.53	55.82
CDX96441	Canola	cytosol	29.74	50.67
AT1G17615.1	Thale cress	cytosol, plastid	50.26	50.26
CDY59925	Canola	cytosol	31.84	49.19
Solyc02g032250.1.1	Tomato	cytosol	8.42	45.07
VIT_05s0051g00300.t01	Wine grape	plastid	12.11	41.44
AT1G72890.2	Thale cress	mitochondrion, plastid	48.16	37.58
KRH08587	Soybean	cytosol	26.32	36.76
KRH09430	Soybean	cytosol	6.58	36.76
CDX72961	Canola	cytosol, plastid	54.74	36.24
KRH09419	Soybean	cytosol, plasma membrane, plastid	7.11	35.06
KRH53793	Soybean	cytosol	19.47	33.33
KRG89385	Soybean	cytosol	17.11	30.37
KRH64151	Soybean	cytosol	27.37	22.41
Bra016026.1-P	Field mustard	cytosol	56.58	18.84

Protein Annotations

MapMan:26.8.2.1	Gene3D:3.40.50.10140	Gene3D:3.40.50.300	EntrezGene:843622	ProteinID:AAD55638.1	ProteinID:AEE35390.1
ArrayExpress:AT1G72910	EnsemblPlantsGene:AT1G72910	RefSeq:AT1G72910	TAIR:AT1G72910	RefSeq:AT1G72910-TAIR-G	EnsemblPlants:AT1G72910.1
TAIR:AT1G72910.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0043531	InterPro:IPR000157	InterPro:IPR035897
InterPro:NB-ARC	RefSeq:NP_177434.1	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF01582	PO:PO:0000293
PFscan:PS50104	PANTHER:PTHR11017	UniProt:Q9SSN5	SMART:SM00255	SUPFAM:SSF52200	SUPFAM:SSF52540
InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf	UniParc:UPI000009C87B	:	:	:

Description

Similar to part of disease resistance protein [Source:UniProtKB/TrEMBL;Acc:Q9SSN5]

Coordinates

chr1:+:27435306..27437192

Molecular Weight (calculated)

42905.3 Da

IEP (calculated)

9.218

GRAVY (calculated)

-0.345

Length

380 amino acids

Sequence
(BLAST)

001: MSSHTATKYD VFLSFRGHDT RQNFISFLYK ELVRRSIRTF KDDKELENGQ RISSELKRTI EVSRFAVVVV SETYAASSWC LDELVTIMDF EKKGSITVMP
101: IFYGVEPNHV RWQTGVLAEQ FKKHGSREDH EKVLKWRQAL TNFAQLSGDC SGDDDSKLVD KIANEISNKK TIYATINNGK NLVGIDTHMK ELNRLMHMNC
201: NKVTVRMVGI WARGGDGRSA LAKYVYQTSC QQFDSHCFLG NVKTISQGRH SAHLHDEFLR NIKREDSNKQ CLKNQKVLLV ADNVTKVKQL EALAGDFSSF
301: GPGSVVIITT DNKGLLNSYG ITDVYEVEHL KFCGILRSLG FKKRAAAFQR ALCRAKSFAT ECFCCQSSSI SGYGKVTDLV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.