CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59925	Canola	cytosol	74.44	67.48
AT1G72930.1	Thale cress	cytosol	45.74	57.95
AT1G72920.1	Thale cress	cytosol	58.3	47.27
Solyc02g032250.1.1	Tomato	cytosol	14.35	45.07
KRH09430	Soybean	cytosol	13.0	42.65
VIT_05s0051g00300.t01	Wine grape	plastid	19.73	39.64
CDX96440	Canola	cytosol	64.13	38.03
CDX72959	Canola	cytosol	62.78	36.75
AT1G72950.1	Thale cress	cytosol	59.64	35.09
AT1G72940.1	Thale cress	cytosol	58.3	35.04
CDY11138	Canola	cytosol, plastid	41.26	34.72
CDX96438	Canola	cytosol	57.85	34.13
AT1G72900.1	Thale cress	cytosol	55.16	33.88
KRH09419	Soybean	cytosol, plasma membrane, plastid	10.76	31.17
CDY26232	Canola	cytosol	53.81	31.09
CDY48315	Canola	cytosol	53.36	30.83
KRG89385	Soybean	cytosol	28.7	29.91
AT1G72910.1	Thale cress	cytosol	50.67	29.74
KRH53793	Soybean	cytosol	29.15	29.28
KRH08587	Soybean	cytosol	34.98	28.68
CDX72961	Canola	cytosol, plastid	65.47	25.44
CDX72958	Canola	plastid	47.98	24.6
CDY11139	Canola	plastid	42.6	24.17
CDY48026	Canola	mitochondrion	49.78	23.87
CDY11140	Canola	mitochondrion	46.19	23.84
CDY67955	Canola	mitochondrion	45.74	23.67
CDX72960	Canola	plastid	46.19	23.46
CDX96439	Canola	mitochondrion, plastid	37.22	20.49
KRH64151	Soybean	cytosol	27.35	13.15
CDX96437	Canola	golgi, mitochondrion	10.76	7.87
CDX68251	Canola	cytosol, plastid	41.7	7.82
CDY16898	Canola	plastid	17.94	7.27
CDX96442	Canola	cytosol	15.7	4.43

Protein Annotations

MapMan:26.8.2.1	Gene3D:3.40.50.10140	GO:A0A078E555	EnsemblPlants:CDX96441	ProteinID:CDX96441	ProteinID:CDX96441.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00102611001	InterPro:IPR000157	InterPro:IPR035897	PFAM:PF01582	PFscan:PS50104
PANTHER:PTHR43904	SMART:SM00255	SUPFAM:SSF52200	InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf	UniParc:UPI0004EF4856

Description

BnaA07g30520D

Coordinates

chrLK031894:+:861118..862249

Molecular Weight (calculated)

25794.6 Da

IEP (calculated)

9.990

GRAVY (calculated)

-0.240

Length

223 amino acids

Sequence
(BLAST)

001: MPSITATTSL RNYDVFLSFR GLDTRRNIVS FLYKELVRKN IRTFKDDKDL ESGRMIPLEL ARAIEQSKLA VVVISKKYAA STWCLEELVK IMDFVNKGSL
101: TVIPVFHNVN PCHVRRQIGQ VALQFKKHEK REDHEKVLSW RQALTTLANI SGYCSRKSKD ESTMVENIAE KISMLIRTRK TRSNERTDGH MEDKQLLVSA
201: RIKLVYETNN GYCFCLCLII FVV

Best Arabidopsis Sequence Match ( AT1G72900.1 )
(BLAST)

001: MSSATATYNY DVFLSFRGPD TRRKFISFLY KELVGRDIRT FKDDKELENG QMISPELILA IEDSRFAVVV VSVNYAASSW CLDELVKIMD IQKNKGSITV
101: MPIFYGVNPC HLRRQIGDVA EQFKKHEARE KDLEKVLKWR QALAALADIS GDCSGEDDSK LVDVIADKIS KELMIVTRIS NGRNLVGIDK HMNELNRLMD
201: LNSNKGKRMV GIWARGGSCR SALAKYVYQT SCQHFDSHCF LGNVKRICQG NYFESHLHKE FLDNIQGENS SKQSLKKQKV LLVADDVDKL EQLDALAGDF
301: SGFGPGSVVI ITTKDKQLLI SYGIQLVYEA EFLTFQKFCR SFRSLAFKKR DDISAAFEWA LYI

Arabidopsis Description

Similar to part of disease resistance protein [Source:UniProtKB/TrEMBL;Acc:Q9SSN6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.