Factsheet for AT1G72950.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G72940.1	Thale cress	cytosol	75.99	77.63
CDX96440	Canola	cytosol	71.24	71.81
CDX72959	Canola	cytosol	72.03	71.65
AT1G72900.1	Thale cress	cytosol	67.02	69.97
AT1G72930.1	Thale cress	cytosol	32.19	69.32
AT1G72920.1	Thale cress	cytosol	49.6	68.36
CDX96438	Canola	cytosol	67.28	67.46
Bra016028.1-P	Field mustard	cytosol	67.02	67.2
AT1G17615.1	Thale cress	cytosol, plastid	61.74	61.58
AT1G72910.1	Thale cress	cytosol	60.69	60.53
CDX96441	Canola	cytosol	35.09	59.64
CDY59925	Canola	cytosol	37.47	57.72
CDX72961	Canola	cytosol, plastid	69.39	45.82
AT1G72890.2	Thale cress	mitochondrion, plastid	58.05	45.17
Solyc02g032250.1.1	Tomato	cytosol	7.92	42.25
KRH09430	Soybean	cytosol	7.12	39.71
VIT_05s0051g00300.t01	Wine grape	plastid	11.61	39.64
KRH08587	Soybean	cytosol	26.91	37.5
KRH09419	Soybean	cytosol, plasma membrane, plastid	7.12	35.06
KRH53793	Soybean	cytosol	20.32	34.68
KRG89385	Soybean	cytosol	18.73	33.18
Bra016026.1-P	Field mustard	cytosol	68.34	22.7
KRH64151	Soybean	cytosol	27.18	22.2

Protein Annotations

MapMan:26.8.2.1	Gene3D:3.40.50.10140	Gene3D:3.40.50.300	EntrezGene:843626	ProteinID:AAD55642.1	ProteinID:AEE35395.1
ArrayExpress:AT1G72950	EnsemblPlantsGene:AT1G72950	RefSeq:AT1G72950	TAIR:AT1G72950	RefSeq:AT1G72950-TAIR-G	EnsemblPlants:AT1G72950.1
TAIR:AT1G72950.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0043531	InterPro:IPR000157	InterPro:IPR035897
InterPro:NB-ARC	RefSeq:NP_177438.1	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF01582	PO:PO:0000293
PO:PO:0009005	PO:PO:0009047	PRINTS:PR00364	PFscan:PS50104	PANTHER:PTHR43904	UniProt:Q9SSN1
SMART:SM00255	SUPFAM:SSF52200	SUPFAM:SSF52540	InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf	UniParc:UPI00000AAEBC
SEG:seg	:	:	:	:	:

Description

Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:Q9SSN1]

Coordinates

chr1:+:27444415..27445997

Molecular Weight (calculated)

43572.7 Da

IEP (calculated)

8.632

GRAVY (calculated)

-0.253

Length

379 amino acids

Sequence
(BLAST)

001: MSDSSNTLPK FDVFLSFRGL DTRRSFISFL YKELIRRNIR TFKDDKELKN GRRITPELIR AIEGSRFAVV VVSVNYAASR WCLEELVKIM DFENMGSLKV
101: MPIFYGVDPC HVRRQIGEVA EQFKKHEGRE DHEKVLSWRQ ALTNLASISG DCSWKWEDDS KMVEEITDRI SKELMIDTTR SNGSDLEGID AHMKALHRLL
201: NLNSKKSVRV IGIWARGGNG RSALAKFVYQ NICQHFESHC FLESVKRISQ DRHLSHLHEE FMIRIQGECL SKLRLKNQKV LLVADDVNKL EQLDALAEDF
301: NCFGPGSIVI ITTQDRQLLI SAGIKLVYEV ELLRFQKVRG LFRQLAFKEK DISAAFEVSL YRATNVAMEW LGCICGRSG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.