Factsheet for AT1G17615.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48315	Canola	cytosol	80.26	79.02
CDY26232	Canola	cytosol	80.26	79.02
Bra025962.1-P	Field mustard	cytosol	80.26	79.02
AT1G72950.1	Thale cress	cytosol	61.58	61.74
AT1G72930.1	Thale cress	cytosol	27.63	59.66
AT1G72940.1	Thale cress	cytosol	57.89	59.3
AT1G72900.1	Thale cress	cytosol	54.21	56.75
AT1G72920.1	Thale cress	cytosol	40.26	55.64
AT1G72910.1	Thale cress	cytosol	50.26	50.26
Solyc02g032250.1.1	Tomato	cytosol	8.68	46.48
AT1G72890.2	Thale cress	mitochondrion, plastid	55.26	43.12
KRH09430	Soybean	cytosol	7.63	42.65
VIT_05s0051g00300.t01	Wine grape	plastid	11.84	40.54
KRH08587	Soybean	cytosol	25.26	35.29
KRH09419	Soybean	cytosol, plasma membrane, plastid	6.84	33.77
KRG89385	Soybean	cytosol	18.95	33.64
KRH53793	Soybean	cytosol	19.21	32.88
KRH64151	Soybean	cytosol	27.37	22.41

Protein Annotations

MapMan:26.8.2.1	Gene3D:3.40.50.10140	Gene3D:3.40.50.300	EntrezGene:838338	UniProt:A0A178WC89	ProteinID:AEE29614.1
ArrayExpress:AT1G17615	EnsemblPlantsGene:AT1G17615	RefSeq:AT1G17615	TAIR:AT1G17615	RefSeq:AT1G17615-TAIR-G	EnsemblPlants:AT1G17615.1
TAIR:AT1G17615.1	EMBL:DQ056455	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607
GO:GO:0009987	GO:GO:0042742	GO:GO:0043531	GO:GO:0050832	InterPro:IPR000157	InterPro:IPR035897
InterPro:NB-ARC	RefSeq:NP_173205.1	ProteinID:OAP15978.1	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF01582
PFscan:PS50104	PANTHER:PTHR43904	UniProt:Q4PT31	SMART:SM00255	SUPFAM:SSF52200	SUPFAM:SSF52540
InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf	UniParc:UPI0000162DD4	SEG:seg	:	:

Description

Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:Q4PT31]

Coordinates

chr1:+:6059389..6060851

Molecular Weight (calculated)

43243.2 Da

IEP (calculated)

8.535

GRAVY (calculated)

-0.214

Length

380 amino acids

Sequence
(BLAST)

001: MYSSSSSSSA TPQKFDVFLS FRGKDTRRTF ISFLYKELIE MGIRTFKDDV ELQSGRRIAS DLLAAIENSK IAVVIISKNY SASPWCLQEL VMIMDVEKKG
101: SIIVMPIFYN VEPAHVRRQI EQVAKQFRKH EGRENYETVV SWRQALTNLA SISGHCSRDC EDDSKLLDEI TKRISDMLFS VTPPSESINN QLGFDARMKE
201: LYPLLDLDSN EGVRVVGIWA RGGNGRSALA RYVYQKIFKK FQSHCFLENV KGIPHDCQMS NLRDEFLIRI QGGYSRMKTS GLIKKRLMSQ KVLLVANNVD
301: KLEQLDALAE YFNCFGPGSI VLITTQDKQL LVAFGIKVVY EVECLRCFEV RQLFRQIGFR ERDLNVGSEL SSPISGTESS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.