CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09430	Soybean	cytosol	33.77	38.24
Solyc02g032250.1.1	Tomato	cytosol	32.47	35.21
VIT_05s0051g00300.t01	Wine grape	plastid	32.47	22.52
KRH53793	Soybean	cytosol	45.45	15.77
AT1G72930.1	Thale cress	cytosol	35.06	15.34
KRG89385	Soybean	cytosol	36.36	13.08
KRH08587	Soybean	cytosol	41.56	11.76
CDX96441	Canola	cytosol	31.17	10.76
CDY59925	Canola	cytosol	32.47	10.16
AT1G72920.1	Thale cress	cytosol	35.06	9.82
CDY11138	Canola	cytosol, plastid	33.77	9.81
CDX96440	Canola	cytosol	36.36	7.45
AT1G72900.1	Thale cress	cytosol	35.06	7.44
Bra016028.1-P	Field mustard	cytosol	36.36	7.41
CDX96438	Canola	cytosol	36.36	7.41
AT1G72940.1	Thale cress	cytosol	35.06	7.28
AT1G72950.1	Thale cress	cytosol	35.06	7.12
AT1G72910.1	Thale cress	cytosol	35.06	7.11
CDX72959	Canola	cytosol	35.06	7.09
AT1G17615.1	Thale cress	cytosol, plastid	33.77	6.84
Bra003864.1-P	Field mustard	mitochondrion	37.66	6.74
CDY67955	Canola	mitochondrion	36.36	6.5
CDY11140	Canola	mitochondrion	36.36	6.48
CDY48315	Canola	cytosol	32.47	6.48
CDY26232	Canola	cytosol	32.47	6.48
Bra025962.1-P	Field mustard	cytosol	32.47	6.48
KRH64151	Soybean	cytosol	38.96	6.47
CDY11139	Canola	plastid	32.47	6.36
Bra016029.1-P	Field mustard	plastid	35.06	6.34
CDX72958	Canola	plastid	35.06	6.21
AT1G72890.2	Thale cress	mitochondrion, plastid	38.96	6.16
CDX72960	Canola	plastid	32.47	5.69
Bra008060.1-P	Field mustard	plastid	31.17	5.29
CDY48026	Canola	mitochondrion	31.17	5.16
CDX72961	Canola	cytosol, plastid	36.36	4.88
CDX96439	Canola	mitochondrion, plastid	23.38	4.44
Bra016027.1-P	Field mustard	plastid	23.38	4.4
Bra016026.1-P	Field mustard	cytosol	36.36	2.45
CDX68251	Canola	cytosol, plastid	31.17	2.02
CDY16898	Canola	plastid	14.29	2.0
Bra003863.1-P	Field mustard	cytosol, plastid	31.17	2.0
CDX96437	Canola	golgi, mitochondrion	5.19	1.31
CDX96442	Canola	cytosol	12.99	1.27

Protein Annotations

Gene3D:3.40.50.10140	MapMan:35.2	ProteinID:AAO23071.1	EMBL:ACUP02010276	EnsemblPlantsGene:GLYMA_16G214700	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
InterPro:IPR000157	InterPro:IPR035897	EnsemblPlants:KRH09419	ProteinID:KRH09419	ProteinID:KRH09419.1	PFAM:PF01582
PFscan:PS50104	PANTHER:PTHR11017	PANTHER:PTHR11017:SF198	UniProt:Q84ZV4	SUPFAM:SSF52200	InterPro:TIR_dom
InterPro:Toll_tir_struct_dom_sf	UniParc:UPI0000003C07	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:37229267..37229500

Molecular Weight (calculated)

8750.5 Da

IEP (calculated)

4.573

GRAVY (calculated)

0.175

Length

77 amino acids

Sequence
(BLAST)

1: MAATTRSCAS IYDVFLSFKG KDTRQDFTGY VYKALDDRGI YTFIDDEELP RGDKIAPALF SFLNPQLVFV ICVSFCF

Best Arabidopsis Sequence Match ( AT1G72890.1 )
(BLAST)

001: MNTIFKKLSC FKKKVKSLRI FESRSLSSSS SSSFTPQKFD VFLSFRGKDT RKNFVSFLYK ALVSKGIRTF KDDEELERGR PIPPELRQAI KGSRIAVVVV
101: SVTYPASSWC LEELREILKL EKLGLLTVIP IFYEINPSDV RRQSGVVSKQ FKKHEKRQSR ERVKSWREAL TKLASLSGEC SKNWEDDSKL VDGITEKIST
201: KLFSEKPRND NILIGIDQHM GELYPLFNLN SNEDVQVIGI WGRGSNGRSA LASHVYQNIK HHFEAHCFLE DVRRISLHFR DSHLQDELLS NMQGEGLTTK
301: NCHRCLKTIK ARLRNKKVLL VANDVDKLEQ FDALAEEFSW FGPGSRIIIT TQDRQLLISS VVRSVYEVKL LRCYAVRELF RSNAFKERER DDPVGFDQST
401: YRAMYISGHV FLTLRYIFTL LCDRGQLRER INAIVHSL

Arabidopsis Description

Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:F4IF04]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.