Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72959 | Canola | cytosol | 89.89 | 88.71 |
| CDX96438 | Canola | cytosol | 83.51 | 83.07 |
| AT1G72950.1 | Thale cress | cytosol | 71.81 | 71.24 |
| AT1G72940.1 | Thale cress | cytosol | 67.02 | 67.92 |
| AT1G72930.1 | Thale cress | cytosol | 31.12 | 66.48 |
| AT1G72920.1 | Thale cress | cytosol | 47.07 | 64.36 |
| CDX96441 | Canola | cytosol | 38.03 | 64.13 |
| AT1G72900.1 | Thale cress | cytosol | 60.64 | 62.81 |
| CDY59925 | Canola | cytosol | 40.16 | 61.38 |
| CDY48315 | Canola | cytosol | 60.11 | 58.55 |
| CDY26232 | Canola | cytosol | 59.57 | 58.03 |
| AT1G72910.1 | Thale cress | cytosol | 58.51 | 57.89 |
| CDX72961 | Canola | cytosol, plastid | 88.03 | 57.67 |
| Solyc02g032250.1.1 | Tomato | cytosol | 8.78 | 46.48 |
| CDX72958 | Canola | plastid | 52.39 | 45.29 |
| CDY11139 | Canola | plastid | 47.07 | 45.04 |
| CDY11138 | Canola | cytosol, plastid | 31.65 | 44.91 |
| CDY11140 | Canola | mitochondrion | 50.53 | 43.98 |
| CDY67955 | Canola | mitochondrion | 50.0 | 43.62 |
| CDX72960 | Canola | plastid | 50.8 | 43.51 |
| CDY48026 | Canola | mitochondrion | 53.72 | 43.44 |
| CDX96439 | Canola | mitochondrion, plastid | 46.01 | 42.72 |
| KRH09430 | Soybean | cytosol | 7.71 | 42.65 |
| VIT_05s0051g00300.t01 | Wine grape | plastid | 12.5 | 42.34 |
| KRH08587 | Soybean | cytosol | 28.19 | 38.97 |
| KRH09419 | Soybean | cytosol, plasma membrane, plastid | 7.45 | 36.36 |
| CDX96437 | Canola | golgi, mitochondrion | 28.99 | 35.74 |
| KRH53793 | Soybean | cytosol | 21.01 | 35.59 |
| KRG89385 | Soybean | cytosol | 19.68 | 34.58 |
| Bra016026.1-P | Field mustard | cytosol | 93.09 | 30.67 |
| KRH64151 | Soybean | cytosol | 26.33 | 21.34 |
| CDX68251 | Canola | cytosol, plastid | 46.54 | 14.71 |
| CDY16898 | Canola | plastid | 18.62 | 12.73 |
| CDX96442 | Canola | cytosol | 15.69 | 7.47 |
Protein Annotations
| MapMan:26.8.2.1 | Gene3D:3.40.50.10140 | Gene3D:3.40.50.300 | GO:A0A078E3C7 | EnsemblPlants:CDX96440 | ProteinID:CDX96440 |
| ProteinID:CDX96440.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00102609001 | InterPro:IPR000157 | InterPro:IPR035897 | InterPro:P-loop_NTPase |
| PFAM:PF01582 | PFscan:PS50104 | PANTHER:PTHR43904 | SMART:SM00255 | SUPFAM:SSF52200 | SUPFAM:SSF52540 |
| InterPro:TIR_dom | InterPro:Toll_tir_struct_dom_sf | UniParc:UPI0004EDE7E3 | SEG:seg | : | : |
Description
BnaA07g30510D
Coordinates
chrLK031894:+:856519..858573
Molecular Weight (calculated)
42908.0 Da
IEP (calculated)
9.738
GRAVY (calculated)
-0.237
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSITPTTS LRKYDVFLSF RGPDTRRNFI SFLYKELVQR NIRTFKDDKE LESGQRISPE LDRAIEESKF AVVVVSANYA ASTWCLEELV KIMDVENKGS
101: LTVIPVFHGV DPCHVRRQIG QVAVQLEKHE MREDREKVLS WRQALTNLAS ISGVCTLKWE DDSMMVDEIA KRISTVIDTT RKPTRTGSNL VGIDAHMKAL
201: SRLVDLNSSK KNVRVVGIWA RGGNGRSALA KFVYQNICQH FESHCFLENV KRTSQDRHMS HLRQEVLKRV QVESNQKVLL VANEVNKLEH FDALAEDFSC
301: FGPGSIVIIT TQDKQLLVSA GIKLVYEVEL LRFRKVRELF RQLGFRVRER AIESVLCKGT SLAMKWLSCC LRVRSG
101: LTVIPVFHGV DPCHVRRQIG QVAVQLEKHE MREDREKVLS WRQALTNLAS ISGVCTLKWE DDSMMVDEIA KRISTVIDTT RKPTRTGSNL VGIDAHMKAL
201: SRLVDLNSSK KNVRVVGIWA RGGNGRSALA KFVYQNICQH FESHCFLENV KRTSQDRHMS HLRQEVLKRV QVESNQKVLL VANEVNKLEH FDALAEDFSC
301: FGPGSIVIIT TQDKQLLVSA GIKLVYEVEL LRFRKVRELF RQLGFRVRER AIESVLCKGT SLAMKWLSCC LRVRSG
001: MSDSSNTLPK FDVFLSFRGL DTRRSFISFL YKELIRRNIR TFKDDKELKN GRRITPELIR AIEGSRFAVV VVSVNYAASR WCLEELVKIM DFENMGSLKV
101: MPIFYGVDPC HVRRQIGEVA EQFKKHEGRE DHEKVLSWRQ ALTNLASISG DCSWKWEDDS KMVEEITDRI SKELMIDTTR SNGSDLEGID AHMKALHRLL
201: NLNSKKSVRV IGIWARGGNG RSALAKFVYQ NICQHFESHC FLESVKRISQ DRHLSHLHEE FMIRIQGECL SKLRLKNQKV LLVADDVNKL EQLDALAEDF
301: NCFGPGSIVI ITTQDRQLLI SAGIKLVYEV ELLRFQKVRG LFRQLAFKEK DISAAFEVSL YRATNVAMEW LGCICGRSG
101: MPIFYGVDPC HVRRQIGEVA EQFKKHEGRE DHEKVLSWRQ ALTNLASISG DCSWKWEDDS KMVEEITDRI SKELMIDTTR SNGSDLEGID AHMKALHRLL
201: NLNSKKSVRV IGIWARGGNG RSALAKFVYQ NICQHFESHC FLESVKRISQ DRHLSHLHEE FMIRIQGECL SKLRLKNQKV LLVADDVNKL EQLDALAEDF
301: NCFGPGSIVI ITTQDRQLLI SAGIKLVYEV ELLRFQKVRG LFRQLAFKEK DISAAFEVSL YRATNVAMEW LGCICGRSG
Arabidopsis Description
Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:Q9SSN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.