CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025962.1-P	Field mustard	cytosol	99.74	99.74
CDY48315	Canola	cytosol	97.15	97.15
AT1G17615.1	Thale cress	cytosol, plastid	79.02	80.26
CDX96440	Canola	cytosol	58.03	59.57
CDX72959	Canola	cytosol	58.29	59.06
CDX96438	Canola	cytosol	55.18	56.35
CDX96441	Canola	cytosol	31.09	53.81
CDY59925	Canola	cytosol	32.38	50.81
CDY11139	Canola	plastid	49.48	48.6
CDX72958	Canola	plastid	54.66	48.51
CDY11140	Canola	mitochondrion	52.07	46.53
CDY11138	Canola	cytosol, plastid	31.87	46.42
CDY67955	Canola	mitochondrion	51.81	46.4
CDX72960	Canola	plastid	52.59	46.24
CDX96439	Canola	mitochondrion, plastid	47.41	45.19
CDY48026	Canola	mitochondrion	54.4	45.16
Solyc02g032250.1.1	Tomato	cytosol	8.29	45.07
KRH09430	Soybean	cytosol	7.25	41.18
CDX96437	Canola	golgi, mitochondrion	31.35	39.67
VIT_05s0051g00300.t01	Wine grape	plastid	11.4	39.64
CDX72961	Canola	cytosol, plastid	57.77	38.85
KRH08587	Soybean	cytosol	24.09	34.19
KRG89385	Soybean	cytosol	18.39	33.18
KRH09419	Soybean	cytosol, plasma membrane, plastid	6.48	32.47
KRH53793	Soybean	cytosol	18.39	31.98
KRH64151	Soybean	cytosol	26.17	21.77
CDX68251	Canola	cytosol, plastid	49.48	16.05
CDY16898	Canola	plastid	18.65	13.09
CDX96442	Canola	cytosol	13.73	6.71

Protein Annotations

MapMan:26.8.2.1	Gene3D:3.40.50.10140	Gene3D:3.40.50.300	GO:A0A078GM18	UniProt:A0A078GM18	EnsemblPlants:CDY26232
ProteinID:CDY26232	ProteinID:CDY26232.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00034902001	InterPro:IPR000157	InterPro:IPR035897
InterPro:P-loop_NTPase	PFAM:PF01582	PFscan:PS50104	PANTHER:PTHR43904	SMART:SM00255	SUPFAM:SSF52200
SUPFAM:SSF52540	InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf	UniParc:UPI0004EF31C6	:	:

Description

BnaA06g11850DBnaA06g11850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GM18]

Coordinates

chrLK032186:-:435932..437566

Molecular Weight (calculated)

43851.1 Da

IEP (calculated)

8.706

GRAVY (calculated)

-0.172

Length

386 amino acids

Sequence
(BLAST)

001: MFSPSSSTTP QKFDVFLSFR GKDTRRIFIS FLYKELIRMS IRTFKDDVEL KSGRRISSDL LLAIEGSKIA VVVVSKKYPA SPWCLHELVK IMDVEKQGSL
101: TVMPIFYNVE PSHVRRQIEK VAEQFTKHEG RENHETVVSW RQALTNLASI SGHCSRDCDD DSKLVDEIIK RISNMLLLSA TPSSDGLNNQ LGIDAHMKEL
201: YPLLGLNSNE GVRLIGIWAR GSSVRSALAR FVYKKIHKKF QSKCFLENVK GIPQDCQMSN LREEFLIRIQ GGYSTMKTSG LIRMRLMSQK VLLVANNVDK
301: LEQLDALADD FNCFGPGSIV IITTHDKQLL VGFGIKVVYE VECLRCFEVR QLFRQSAFRE RDLYVDSEMF STLSVTESSG NSVYDS

Best Arabidopsis Sequence Match ( AT1G17615.1 )
(BLAST)

001: MYSSSSSSSA TPQKFDVFLS FRGKDTRRTF ISFLYKELIE MGIRTFKDDV ELQSGRRIAS DLLAAIENSK IAVVIISKNY SASPWCLQEL VMIMDVEKKG
101: SIIVMPIFYN VEPAHVRRQI EQVAKQFRKH EGRENYETVV SWRQALTNLA SISGHCSRDC EDDSKLLDEI TKRISDMLFS VTPPSESINN QLGFDARMKE
201: LYPLLDLDSN EGVRVVGIWA RGGNGRSALA RYVYQKIFKK FQSHCFLENV KGIPHDCQMS NLRDEFLIRI QGGYSRMKTS GLIKKRLMSQ KVLLVANNVD
301: KLEQLDALAE YFNCFGPGSI VLITTQDKQL LVAFGIKVVY EVECLRCFEV RQLFRQIGFR ERDLNVGSEL SSPISGTESS

Arabidopsis Description

Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:Q4PT31]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.