CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08587	Soybean	cytosol	12.36	25.0
KRH53793	Soybean	cytosol	10.0	24.77
KRG89385	Soybean	cytosol	8.36	21.5
CDX96439	Canola	mitochondrion, plastid	15.27	20.74
CDX72958	Canola	plastid	14.91	18.85
CDY48315	Canola	cytosol	13.09	18.65
CDY26232	Canola	cytosol	13.09	18.65
CDX96440	Canola	cytosol	12.73	18.62
CDY48026	Canola	mitochondrion	15.45	18.28
CDX72960	Canola	plastid	14.55	18.22
VIT_05s0051g00300.t01	Wine grape	plastid	3.64	18.02
CDX96441	Canola	cytosol	7.27	17.94
CDX72959	Canola	cytosol	12.36	17.85
CDY11139	Canola	plastid	12.73	17.81
CDY11138	Canola	cytosol, plastid	8.55	17.74
CDX96438	Canola	cytosol	12.0	17.46
CDY11140	Canola	mitochondrion	13.45	17.13
CDX96437	Canola	golgi, mitochondrion	9.27	16.72
CDY67955	Canola	mitochondrion	13.09	16.71
CDY59925	Canola	cytosol	7.45	16.67
KRH64151	Soybean	cytosol	14.0	16.59
KRH09430	Soybean	cytosol	1.82	14.71
KRH09419	Soybean	cytosol, plasma membrane, plastid	2.0	14.29
Solyc02g032250.1.1	Tomato	cytosol	1.82	14.08
CDX72961	Canola	cytosol, plastid	14.18	13.59
CDX68251	Canola	cytosol, plastid	13.64	6.3
CDX96442	Canola	cytosol	8.91	6.2

Protein Annotations

EnsemblPlants:CDY16898	EnsemblPlantsGene:GSBRNA2T00094807001	Gene3D:3.40.50.10140	Gene3D:3.40.50.300	Gene3D:3.80.10.10	InterPro:IPR032675
InterPro:IPR035897	InterPro:LRR_dom_sf	InterPro:P-loop_NTPase	InterPro:Toll_tir_struct_dom_sf	PANTHER:PTHR43904	PRINTS:PR00364
ProteinID:CDY16898	ProteinID:CDY16898.1	SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI0004EECD4B
UniProt:A0A078FWV5	MapMan:26.8.2.1	:	:	:	:

Description

BnaC09g40250DBnaC09g40250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWV5]

Coordinates

chrLK032068:-:216568..220052

Molecular Weight (calculated)

61906.9 Da

IEP (calculated)

8.693

GRAVY (calculated)

-0.153

Length

550 amino acids

Sequence
(BLAST)

001: MASAIVPSLR LSPSLSDATS PSSPSSSGDD LGAIQETTGS WRSKGFTETL ISPLLFTLDH HPEGYHGLIK QEVFSITSKS TVQKLFTLLE LYCRESIGRY
101: IRGAPLVDKA DANLDSDESI SALTIALVSS GPSLRARFVG QGYKHVCGRA DMWYLRFQLI LKRIHGLSSF DKKKVKKWKE ALTILAAISG EDSRNWRDES
201: KLIKKIVKDI SDKLVFTSLD DSKGLIGMSS HMDFLQSMMS IEDEDVRMVG IWGMGGVGKT TIAKYLYSGL SCRFQAHCFI ENVKEVYNRY GVRHFTRRVS
301: MQNVWRAFEG LSNLKLLNFY DLAYNGETRM HLPDGLSYLP RKLRSLHWDG YPLKSMPSRF HPEFLVEFCM SNSHLQKLWN GVQSFPPEIC QTMRCLRWLD
401: LEGTGIKELP ENNGNLIALK VLQARRTAIR RAPRSIALLT RLQVLAIGDS FYVSEGLHSL CPRLSSFDDL RVLCLSNMNM TEIPNSIGDL WSLSELDLSG
501: NNFEFIPASI KGLARLNILN LNNCQRLQAL PDELPRGLLY IYAHGCASLE

Best Arabidopsis Sequence Match ( AT5G17680.1 )
(BLAST)

0001: MASLPSSSSS SSSTVWKTDV FVSFRGEDVR KTFVSHLFCE FDRMGIKAFR DDLDLQRGKS ISPELIDAIK GSRFAIVVVS RNYAASSWCL DELLKIMECN
0101: KDTIVPIFYE VDPSDVRRQR GSFGEDVESH SDKEKVGKWK EALKKLAAIS GEDSRNWDDS KLIKKIVKDI SDKLVSTSWD DSKGLIGMSS HMDFLQSMIS
0201: IVDKDVRMLG IWGMGGVGKT TIAKYLYNQL SGQFQVHCFM ENVKEVCNRY GVRRLQVEFL CRMFQERDKE AWSSVSCCNI IKERFRHKMV FIVLDDVDRS
0301: EQLNELVKET GWFGPGSRII VTTRDRHLLL SHGINLVYKV KCLPKKEALQ LFCNYAFREE IILPHGFEEL SVQAVNYASG LPLALRVLGS FLYRRSQIEW
0401: ESTLARLKTY PHSDIMEVLR VSYDGLDEQE KAIFLYISCF YNMKQVDYVR KLLDLCGYAA EIGITILTEK SLIVESNGCV KIHDLLEQMG RELVRQQAVN
0501: NPAQRLLLWD PEDICHLLSE NSGTQLVEGI SLNLSEISEV FASDRAFEGL SNLKLLNFYD LSFDGETRVH LPNGLSYLPR KLRYLRWDGY PLKTMPSRFF
0601: PEFLVELCMS NSNLEKLWDG IQPLRNLKKM DLSRCKYLVE VPDLSKATNL EELNLSYCQS LVEVTPSIKN LKGLSCFYLT NCIQLKDIPI GIILKSLETV
0701: GMSGCSSLKH FPEISWNTRR LYLSSTKIEE LPSSISRLSC LVKLDMSDCQ RLRTLPSYLG HLVSLKSLNL DGCRRLENLP DTLQNLTSLE TLEVSGCLNV
0801: NEFPRVSTSI EVLRISETSI EEIPARICNL SQLRSLDISE NKRLASLPVS ISELRSLEKL KLSGCSVLES FPLEICQTMS CLRWFDLDRT SIKELPENIG
0901: NLVALEVLQA SRTVIRRAPW SIARLTRLQV LAIGNSFFTP EGLLHSLCPP LSRFDDLRAL SLSNMNMTEI PNSIGNLWNL LELDLSGNNF EFIPASIKRL
1001: TRLNRLNLNN CQRLQALPDE LPRGLLYIYI HSCTSLVSIS GCFNQYCLRK LVASNCYKLD QAAQILIHRN LKLESAKPEH SYFPGSDIPT CFNHQVMGPS
1101: LNIQLPQSES SSDILGFSAC IMIGVDGQYP MNNLKIHCSC ILKDADACEL VVMDEVWYPD PKAFTNMYFG SDHLLLFSRT CTSMEAYSEA LFEFSVENTE
1201: GDSFSPLGEV KKCAVHLISL KDMMQEFSND SDKIQSSDLD LPKAFDDARI LKRRAYETEF LHKEQLNPKR IKFLPVPLAR ERHSKLHQRN VIRK

Arabidopsis Description

Disease resistance protein (TIR-NBS-LRR class) [Source:UniProtKB/TrEMBL;Acc:Q9FN83]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.