CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016027.1-P	Field mustard	plastid	99.75	98.78
CDX72960	Canola	plastid	91.11	84.05
CDX72958	Canola	plastid	87.41	81.38
CDX96437	Canola	golgi, mitochondrion	54.32	72.13
CDY11140	Canola	mitochondrion	64.94	60.88
CDY48026	Canola	mitochondrion	69.88	60.86
CDY67955	Canola	mitochondrion	61.98	58.24
CDY11139	Canola	plastid	55.8	57.51
AT1G72890.2	Thale cress	mitochondrion, plastid	68.15	56.67
CDY11138	Canola	cytosol, plastid	32.1	49.06
CDY48315	Canola	cytosol	45.43	47.67
CDY26232	Canola	cytosol	45.19	47.41
CDX96440	Canola	cytosol	42.72	46.01
CDX72959	Canola	cytosol	42.96	45.67
CDX96438	Canola	cytosol	41.48	44.44
CDY59925	Canola	cytosol	23.46	38.62
CDX96441	Canola	cytosol	20.49	37.22
VIT_05s0051g00300.t01	Wine grape	plastid	9.63	35.14
KRH08587	Soybean	cytosol	22.96	34.19
Solyc02g032250.1.1	Tomato	cytosol	5.68	32.39
CDX72961	Canola	cytosol, plastid	43.46	30.66
KRG89385	Soybean	cytosol	16.05	30.37
KRH09430	Soybean	cytosol	4.94	29.41
KRH53793	Soybean	cytosol	14.07	25.68
KRH09419	Soybean	cytosol, plasma membrane, plastid	4.44	23.38
CDX68251	Canola	cytosol, plastid	57.28	19.5
KRH64151	Soybean	cytosol	21.23	18.53
CDY16898	Canola	plastid	20.74	15.27
CDX96442	Canola	cytosol	14.81	7.59

Protein Annotations

Gene3D:3.40.50.10140	Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078E6V9	EnsemblPlants:CDX96439	ProteinID:CDX96439
ProteinID:CDX96439.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0043531	EnsemblPlantsGene:GSBRNA2T00102607001	InterPro:IPR000157
InterPro:IPR035897	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF01582	PRINTS:PR00364
PFscan:PS50104	PANTHER:PTHR11017	SMART:SM00255	SUPFAM:SSF52200	SUPFAM:SSF52540	InterPro:TIR_dom
InterPro:Toll_tir_struct_dom_sf	UniParc:UPI0004EE08F6	SEG:seg	:	:	:

Description

BnaA07g30500D

Coordinates

chrLK031894:+:852337..853850

Molecular Weight (calculated)

46901.9 Da

IEP (calculated)

9.996

GRAVY (calculated)

-0.423

Length

405 amino acids

Sequence
(BLAST)

001: MNRILKKLSC FKTKVKSLRL FESNSSLSSS SSSSFTPQKY NVFLNFRGAD TRKNFVSFLY RDLVAKEIRT FKDDKELERG QLVKILKLEK QGLIKVLPIF
101: YDVDPCDVRR QTGAVKKHFE KHKKRLSREK VKSWRDALNY LAELSGECSQ NWEDDSKLVV EITERISKML FSVKPRNGNN LIGIDEHMNE LYPRLDLSSK
201: EGVRVIGIWG RGSMGRSALA RHVYESISHN FEAHCFLEDV RKISQHCRKS HLQEELLSMM QGEGLNTKSS HRCLKAIKAR LRNKKVLLVA NDVDKIEQLE
301: SLGEEFSWFG HGSRVVITTQ DRQLLSSWGV KIVYEVEFLK CCEVRKLFRS EAFKQREVDP VGLEQSTYHP HMNFLGINFI LKCLVALLCD TGQLKERLSA
401: LIYTR

Best Arabidopsis Sequence Match ( AT1G17615.1 )
(BLAST)

001: MYSSSSSSSA TPQKFDVFLS FRGKDTRRTF ISFLYKELIE MGIRTFKDDV ELQSGRRIAS DLLAAIENSK IAVVIISKNY SASPWCLQEL VMIMDVEKKG
101: SIIVMPIFYN VEPAHVRRQI EQVAKQFRKH EGRENYETVV SWRQALTNLA SISGHCSRDC EDDSKLLDEI TKRISDMLFS VTPPSESINN QLGFDARMKE
201: LYPLLDLDSN EGVRVVGIWA RGGNGRSALA RYVYQKIFKK FQSHCFLENV KGIPHDCQMS NLRDEFLIRI QGGYSRMKTS GLIKKRLMSQ KVLLVANNVD
301: KLEQLDALAE YFNCFGPGSI VLITTQDKQL LVAFGIKVVY EVECLRCFEV RQLFRQIGFR ERDLNVGSEL SSPISGTESS

Arabidopsis Description

Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:Q4PT31]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.