Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96440 | Canola | cytosol | 88.71 | 89.89 |
| CDX96438 | Canola | cytosol | 88.98 | 89.68 |
| AT1G72950.1 | Thale cress | cytosol | 71.65 | 72.03 |
| AT1G72940.1 | Thale cress | cytosol | 66.93 | 68.73 |
| AT1G72930.1 | Thale cress | cytosol | 29.4 | 63.64 |
| CDX96441 | Canola | cytosol | 36.75 | 62.78 |
| AT1G72920.1 | Thale cress | cytosol | 45.14 | 62.55 |
| AT1G72900.1 | Thale cress | cytosol | 59.58 | 62.53 |
| CDY59925 | Canola | cytosol | 39.37 | 60.98 |
| CDY48315 | Canola | cytosol | 59.32 | 58.55 |
| CDY26232 | Canola | cytosol | 59.06 | 58.29 |
| AT1G72910.1 | Thale cress | cytosol | 56.96 | 57.11 |
| CDX72961 | Canola | cytosol, plastid | 83.73 | 55.57 |
| Solyc02g032250.1.1 | Tomato | cytosol | 8.66 | 46.48 |
| CDX72958 | Canola | plastid | 51.97 | 45.52 |
| CDY11139 | Canola | plastid | 46.19 | 44.78 |
| CDY11140 | Canola | mitochondrion | 49.87 | 43.98 |
| CDY11138 | Canola | cytosol, plastid | 30.45 | 43.77 |
| CDX72960 | Canola | plastid | 50.13 | 43.51 |
| CDY48026 | Canola | mitochondrion | 53.02 | 43.44 |
| CDY67955 | Canola | mitochondrion | 49.08 | 43.39 |
| CDX96439 | Canola | mitochondrion, plastid | 45.67 | 42.96 |
| KRH09430 | Soybean | cytosol | 7.61 | 42.65 |
| VIT_05s0051g00300.t01 | Wine grape | plastid | 11.81 | 40.54 |
| KRH08587 | Soybean | cytosol | 28.35 | 39.71 |
| CDX96437 | Canola | golgi, mitochondrion | 29.66 | 37.05 |
| KRH53793 | Soybean | cytosol | 21.26 | 36.49 |
| KRG89385 | Soybean | cytosol | 19.95 | 35.51 |
| KRH09419 | Soybean | cytosol, plasma membrane, plastid | 7.09 | 35.06 |
| KRH64151 | Soybean | cytosol | 27.3 | 22.41 |
| CDX68251 | Canola | cytosol, plastid | 46.19 | 14.79 |
| CDY16898 | Canola | plastid | 17.85 | 12.36 |
| CDX96442 | Canola | cytosol | 16.8 | 8.1 |
Protein Annotations
| MapMan:26.8.2.1 | Gene3D:3.40.50.10140 | Gene3D:3.40.50.300 | GO:A0A078C9T6 | EnsemblPlants:CDX72959 | ProteinID:CDX72959 |
| ProteinID:CDX72959.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0043531 | EnsemblPlantsGene:GSBRNA2T00103386001 | InterPro:IPR000157 |
| InterPro:IPR035897 | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PFAM:PF01582 | PRINTS:PR00364 |
| PFscan:PS50104 | PANTHER:PTHR11017 | SMART:SM00255 | SUPFAM:SSF52200 | SUPFAM:SSF52540 | InterPro:TIR_dom |
| InterPro:Toll_tir_struct_dom_sf | UniParc:UPI0004EF3DA2 | : | : | : | : |
Description
BnaC06g34070D
Coordinates
chrLK031797:+:1321595..1324184
Molecular Weight (calculated)
43421.8 Da
IEP (calculated)
9.561
GRAVY (calculated)
-0.226
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSTPPTIP KYDVFLSFRG LDTRRSFISF LYKELVRRNI RTFKDDKELE SGREISPELE RAIEESKFAV VVISANYAAS TWCLQELVKI MDFVNKGSLT
101: VIPVFHGVDP CHVRRQIEKV AVQLEKHEKR EDREKVLSWR QALTNLANIS GVCTLKCEDD SMMVDEIAKR ISTLIDTTRK PTRTGSNLVG IDVHMKALSR
201: LLDLNSSKKS VRVIGIWGRG GNGRSALAEF VYKNICQHFE SHCFLENVKR ISQDRHMSHL HQEVLKRVQV ESNSNQKVLL VANEVNKLEQ LDALAEDFSC
301: FGPGSIVIIT TQDKQLLVSA GIKLVYEAEL LTFQKVRELF RQLGFRVRER AIESVLCKGT NLAMKWLGCC LRVRSGYRKV S
101: VIPVFHGVDP CHVRRQIEKV AVQLEKHEKR EDREKVLSWR QALTNLANIS GVCTLKCEDD SMMVDEIAKR ISTLIDTTRK PTRTGSNLVG IDVHMKALSR
201: LLDLNSSKKS VRVIGIWGRG GNGRSALAEF VYKNICQHFE SHCFLENVKR ISQDRHMSHL HQEVLKRVQV ESNSNQKVLL VANEVNKLEQ LDALAEDFSC
301: FGPGSIVIIT TQDKQLLVSA GIKLVYEAEL LTFQKVRELF RQLGFRVRER AIESVLCKGT NLAMKWLGCC LRVRSGYRKV S
001: MSDSSNTLPK FDVFLSFRGL DTRRSFISFL YKELIRRNIR TFKDDKELKN GRRITPELIR AIEGSRFAVV VVSVNYAASR WCLEELVKIM DFENMGSLKV
101: MPIFYGVDPC HVRRQIGEVA EQFKKHEGRE DHEKVLSWRQ ALTNLASISG DCSWKWEDDS KMVEEITDRI SKELMIDTTR SNGSDLEGID AHMKALHRLL
201: NLNSKKSVRV IGIWARGGNG RSALAKFVYQ NICQHFESHC FLESVKRISQ DRHLSHLHEE FMIRIQGECL SKLRLKNQKV LLVADDVNKL EQLDALAEDF
301: NCFGPGSIVI ITTQDRQLLI SAGIKLVYEV ELLRFQKVRG LFRQLAFKEK DISAAFEVSL YRATNVAMEW LGCICGRSG
101: MPIFYGVDPC HVRRQIGEVA EQFKKHEGRE DHEKVLSWRQ ALTNLASISG DCSWKWEDDS KMVEEITDRI SKELMIDTTR SNGSDLEGID AHMKALHRLL
201: NLNSKKSVRV IGIWARGGNG RSALAKFVYQ NICQHFESHC FLESVKRISQ DRHLSHLHEE FMIRIQGECL SKLRLKNQKV LLVADDVNKL EQLDALAEDF
301: NCFGPGSIVI ITTQDRQLLI SAGIKLVYEV ELLRFQKVRG LFRQLAFKEK DISAAFEVSL YRATNVAMEW LGCICGRSG
Arabidopsis Description
Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:Q9SSN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.