CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53793	Soybean	cytosol	48.53	59.46
KRG89385	Soybean	cytosol	42.28	53.74
KRH09430	Soybean	cytosol	13.24	52.94
Solyc02g032250.1.1	Tomato	cytosol	12.87	49.3
AT1G72930.1	Thale cress	cytosol	27.57	42.61
KRH09419	Soybean	cytosol, plasma membrane, plastid	11.76	41.56
VIT_05s0051g00300.t01	Wine grape	plastid	14.71	36.04
CDX96441	Canola	cytosol	28.68	34.98
CDY59925	Canola	cytosol	29.78	32.93
AT1G72920.1	Thale cress	cytosol	32.35	32.0
CDY11138	Canola	cytosol, plastid	30.15	30.94
KRH64151	Soybean	cytosol	50.0	29.31
CDX72959	Canola	cytosol	39.71	28.35
CDX96440	Canola	cytosol	38.97	28.19
AT1G72900.1	Thale cress	cytosol	37.13	27.82
AT1G72950.1	Thale cress	cytosol	37.5	26.91
Bra016029.1-P	Field mustard	plastid	41.91	26.76
Bra016028.1-P	Field mustard	cytosol	37.13	26.72
CDX96438	Canola	cytosol	37.13	26.72
AT1G72910.1	Thale cress	cytosol	36.76	26.32
AT1G72940.1	Thale cress	cytosol	35.66	26.15
CDX72958	Canola	plastid	40.44	25.29
AT1G17615.1	Thale cress	cytosol, plastid	35.29	25.26
CDX72960	Canola	plastid	39.71	24.6
CDY48315	Canola	cytosol	34.56	24.35
Bra025962.1-P	Field mustard	cytosol	34.19	24.09
CDY26232	Canola	cytosol	34.19	24.09
CDY11140	Canola	mitochondrion	38.24	24.07
CDY67955	Canola	mitochondrion	37.13	23.43
Bra008060.1-P	Field mustard	plastid	38.97	23.35
Bra003864.1-P	Field mustard	mitochondrion	36.76	23.26
CDY11139	Canola	plastid	33.46	23.16
CDY48026	Canola	mitochondrion	39.34	23.01
CDX96439	Canola	mitochondrion, plastid	34.19	22.96
Bra016027.1-P	Field mustard	plastid	34.19	22.74
AT1G72890.2	Thale cress	mitochondrion, plastid	39.34	21.97
CDX72961	Canola	cytosol, plastid	38.6	18.29
CDX96437	Canola	golgi, mitochondrion	17.28	15.41
CDY16898	Canola	plastid	25.0	12.36
Bra016026.1-P	Field mustard	cytosol	39.34	9.38
CDX68251	Canola	cytosol, plastid	33.46	7.65
Bra003863.1-P	Field mustard	cytosol, plastid	33.09	7.5
CDX96442	Canola	cytosol	13.24	4.56

Protein Annotations

MapMan:26.8.2.1	Gene3D:3.40.50.10140	Gene3D:3.40.50.300	UniProt:A0A0R0G0Q0	EMBL:ACUP02010183	ncoils:Coil
EnsemblPlantsGene:GLYMA_16G159200	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0043531	InterPro:IPR000157	InterPro:IPR035897
EnsemblPlants:KRH08587	ProteinID:KRH08587	ProteinID:KRH08587.1	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
PFAM:PF01582	PFscan:PS50104	PANTHER:PTHR11017	PANTHER:PTHR11017:SF198	SMART:SM00255	SUPFAM:SSF52200
SUPFAM:SSF52540	InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf	UniParc:UPI0006ED7D92	SEG:seg	:

Description

hypothetical protein

Coordinates

chr16:+:31894996..31901880

Molecular Weight (calculated)

31241.3 Da

IEP (calculated)

8.852

GRAVY (calculated)

-0.398

Length

272 amino acids

Sequence
(BLAST)

001: MSSTSFSNGW KYDVFLNFRG SDTRYGFTGH LYKALCDRKV RTFIDDEELQ RGEQITPSLL KAIEESRIFI PVFSKNYASS TFCLDELVHI FACVKEKSRL
101: VLPVFYEVDP SHVRHQRGSY KEALNSHKKR FNDDQEKLQK WRNALSQAAN LSGYHFKQGK EEYEYDFIAK IVKEVSQKIN RTLLHVADFP VGLEYRMQDV
201: NSLVNIESGG VHMIGIHGVG GVGKSTLARA IYNLIADQFE GYCFLNVREY SMQNGLVHLQ KKLLSKTIGE KC

Best Arabidopsis Sequence Match ( AT1G27170.1 )
(BLAST)

0001: MESGVVSKPH RLKYDVFLSF RGADTRDNFG DHLYKALKDK VRVFRDNEGM ERGDEISSSL KAGMEDSAAS VIVISRNYSG SRWCLDELAM LCKMKSSLDR
0101: RILPIFYHVD PSHVRKQSDH IKKDFEEHQV RFSEEKEKVQ EWREALTLVG NLAGYVCDKD SKDDDMIELV VKRVLAELSN TPEKVGEFIV GLESPLKDLT
0201: GLIDTESSSG VQVLGLYGMG GIGKTTLAKA FYNKIVGNFE QRAFISDIRE RSSAENGLVT LQKTLIKELF RLVPEIEDVS IGLEKIKANV HEKKIIVVLD
0301: DVDHIDQVHA LVGETRWYGQ GTLIVITTRD SEILSKLSVN QQYEVKCLTE PQALKLFSYH SLRKEEPTKN LLALSKKIVQ ISGLLPLAVE VFGSLLYDKK
0401: EEKDWQTQLD KLKKTQPGNL QDVLELSFKS LDDEEKKVFL DIACLFLKME IKKDEVVIVL KGCGLNAEAA LSVLRQKSLV KILANDTLWM HDQIRDMGRQ
0501: MVLKESREDP GLRSRLWDRG EIMTVLNNMK GTSSIRGIVL DFKKKFARDP TADEIVSRNL RNNPGIYSVF NYLKNKLVRF PAEEKPKSSE ITIPVESFAP
0601: MTKLRLLQIN NVELEGNLKL LPSELKWIQW KGCPLENLPP DFLARQLSVL DLSESGIRQV QTLRNKMVDE NLKVVILRGC HSLEAIPDLS NHEALEKLVF
0701: EQCTLLVKVP KSVGNLRKLI HLDFRRCSKL SEFLVDVSGL KLLEKLFLSG CSDLSVLPEN IGAMTSLKEL LLDGTAIKNL PESINRLQNL EILSLRGCKI
0801: QELPLCIGTL KSLEKLYLDD TALKNLPSSI GDLKNLQDLH LVRCTSLSKI PDSINELKSL KKLFINGSAV EELPLKPSSL PSLYDFSAGD CKFLKQVPSS
0901: IGRLNSLLQL QLSSTPIEAL PEEIGALHFI RELELRNCKF LKFLPKSIGD MDTLYSLNLE GSNIEELPEE FGKLEKLVEL RMSNCKMLKR LPESFGDLKS
1001: LHRLYMKETL VSELPESFGN LSNLMVLEML KKPLFRISES NVPGTSEEPR FVEVPNSFSK LLKLEELDAC SWRISGKIPD DLEKLSCLMK LNLGNNYFHS
1101: LPSSLVKLSN LQELSLRDCR ELKRLPPLPC KLEQLNLANC FSLESVSDLS ELTILTDLNL TNCAKVVDIP GLEHLTALKR LYMTGCNSNY SLAVKKRLSK
1201: ASLKMMRNLS LPGNRVPDWF SQGPVTFSAQ PNRELRGVII AVVVALNDET EDDDYQLPDV MEVQAQIHKL DHHKCTNTLH LSGVPRTNND QLHICRYSAF
1301: HPLVTMLKDG YTIQVIKRNP PIKQGVELKM HGIHLVYEGD DDLEGRENTL PETQQTVSQK LANFFSSFEE EEGETISESE STVI

Arabidopsis Description

Transmembrane receptors / ATP binding protein [Source:UniProtKB/TrEMBL;Acc:F4HR53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.