Factsheet for Bra016028.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96438	Canola	cytosol	99.47	99.47
AT1G72950.1	Thale cress	cytosol	67.2	67.02
AT1G72940.1	Thale cress	cytosol	62.96	64.15
AT1G72930.1	Thale cress	cytosol	29.37	63.07
AT1G72920.1	Thale cress	cytosol	42.86	58.91
AT1G72900.1	Thale cress	cytosol	56.35	58.68
AT1G72910.1	Thale cress	cytosol	55.82	55.53
Bra025962.1-P	Field mustard	cytosol	55.82	54.66
Solyc02g032250.1.1	Tomato	cytosol	8.73	46.48
Bra016029.1-P	Field mustard	plastid	50.53	44.84
Bra008060.1-P	Field mustard	plastid	50.26	41.85
Bra003864.1-P	Field mustard	mitochondrion	47.35	41.63
KRH09430	Soybean	cytosol	7.41	41.18
Bra016027.1-P	Field mustard	plastid	44.44	41.08
VIT_05s0051g00300.t01	Wine grape	plastid	11.64	39.64
KRH08587	Soybean	cytosol	26.72	37.13
KRH09419	Soybean	cytosol, plasma membrane, plastid	7.41	36.36
KRH53793	Soybean	cytosol	19.84	33.78
KRG89385	Soybean	cytosol	18.52	32.71
Bra016026.1-P	Field mustard	cytosol	76.72	25.42
KRH64151	Soybean	cytosol	25.4	20.69
Bra003863.1-P	Field mustard	cytosol, plastid	45.5	14.33

Protein Annotations

MapMan:26.8.2.1	Gene3D:3.40.50.10140	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra016028	EnsemblPlants:Bra016028.1	EnsemblPlants:Bra016028.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	InterPro:IPR000157	InterPro:IPR035897	UniProt:M4DHQ1	InterPro:P-loop_NTPase	PFAM:PF01582
PRINTS:PR00364	PFscan:PS50104	PANTHER:PTHR11017	SMART:SM00255	SUPFAM:SSF52200	SUPFAM:SSF52540
InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf	UniParc:UPI0002541CB1	:	:	:

Description

AT1G72950 (E=1e-142) | disease resistance protein (TIR-NBS class), putative

Coordinates

chrA07:+:19769107..19770473

Molecular Weight (calculated)

43170.2 Da

IEP (calculated)

9.410

GRAVY (calculated)

-0.262

Length

378 amino acids

Sequence
(BLAST)

001: MTSSTPPTIP KYDVFLSFRG LDTRRNFISF LYKELVRRNI RTFKDDKELE SGRKISPELE RAIQESKFAV VVISANYAAS TWCLQELVKI MDFVNKGSLT
101: VIPVFHGVEP CHVRWQMEKF AVQFEEHKSE DREKVLSWGH ALTNLANISG HCSSEWEDDS MMVDEIARRI STWIDTTRKP TRTGSNLVGI DVHMKAVSRL
201: IDLNSKKKSV RVIGIWGRGG NGRSALAEFV YKNICQHFGS HCFLENVKRI SQDRHMSHLR QEVLKRVQVE SNQKVLLVAK EVNKIEHFDA LAEDFSCFGP
301: GSIVIITTQD KQLLVSAGIK LVYEAEPLAF QKVRELFRQL GFRVREGAIE SELCKGTNLA MKWLGCCLPV RSGYRKLS

Best Arabidopsis Sequence Match ( AT1G72950.1 )
(BLAST)

001: MSDSSNTLPK FDVFLSFRGL DTRRSFISFL YKELIRRNIR TFKDDKELKN GRRITPELIR AIEGSRFAVV VVSVNYAASR WCLEELVKIM DFENMGSLKV
101: MPIFYGVDPC HVRRQIGEVA EQFKKHEGRE DHEKVLSWRQ ALTNLASISG DCSWKWEDDS KMVEEITDRI SKELMIDTTR SNGSDLEGID AHMKALHRLL
201: NLNSKKSVRV IGIWARGGNG RSALAKFVYQ NICQHFESHC FLESVKRISQ DRHLSHLHEE FMIRIQGECL SKLRLKNQKV LLVADDVNKL EQLDALAEDF
301: NCFGPGSIVI ITTQDRQLLI SAGIKLVYEV ELLRFQKVRG LFRQLAFKEK DISAAFEVSL YRATNVAMEW LGCICGRSG

Arabidopsis Description

Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:Q9SSN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.