Factsheet for Bra025962.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26232	Canola	cytosol	99.74	99.74
AT1G17615.1	Thale cress	cytosol, plastid	79.02	80.26
Bra016028.1-P	Field mustard	cytosol	54.66	55.82
Bra016029.1-P	Field mustard	plastid	54.4	49.3
Bra003864.1-P	Field mustard	mitochondrion	51.55	46.28
Bra008060.1-P	Field mustard	plastid	53.89	45.81
Solyc02g032250.1.1	Tomato	cytosol	8.29	45.07
Bra016027.1-P	Field mustard	plastid	47.67	44.99
KRH09430	Soybean	cytosol	7.25	41.18
VIT_05s0051g00300.t01	Wine grape	plastid	11.4	39.64
KRH08587	Soybean	cytosol	24.09	34.19
KRG89385	Soybean	cytosol	18.39	33.18
KRH09419	Soybean	cytosol, plasma membrane, plastid	6.48	32.47
KRH53793	Soybean	cytosol	18.39	31.98
KRH64151	Soybean	cytosol	26.17	21.77
Bra016026.1-P	Field mustard	cytosol	57.77	19.54
Bra003863.1-P	Field mustard	cytosol, plastid	50.0	16.08

Protein Annotations

MapMan:26.8.2.1	Gene3D:3.40.50.10140	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra025962	EnsemblPlants:Bra025962.1	EnsemblPlants:Bra025962.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0042742	GO:GO:0050832
InterPro:IPR000157	InterPro:IPR035897	UniProt:M4EB03	InterPro:P-loop_NTPase	PFAM:PF01582	PFscan:PS50104
PANTHER:PTHR43904	SMART:SM00255	SUPFAM:SSF52200	SUPFAM:SSF52540	InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf
UniParc:UPI000253F360	:	:	:	:	:

Description

AT1G17615 (E=4e-176) | disease resistance protein (TIR-NBS class), putative

Coordinates

chrA06:+:6733397..6735031

Molecular Weight (calculated)

43821.0 Da

IEP (calculated)

8.706

GRAVY (calculated)

-0.178

Length

386 amino acids

Sequence
(BLAST)

001: MFSPSSSTTP QKFDVFLSFR GKDTRRIFIS FLYKELIRMS IRTFKDDVEL KSGRRISSDL LLAIEGSKIA VVVVSKKYPA SPWCLHELVK IMDVEKQGSL
101: TVMPIFYNVE PSHVRRQIEK VAEQFTKHEG RENHETVVSW RQALTNLASI SGHCSRDCDD DSKLVDEIIK RISNMLLLSA TPSSDGLNNQ LGIDAHMKEL
201: YPLLGLNSNE GVRLIGIWAR GSSVRSALAR FVYKKIHKKF QSKCFLENVK GIPQDCQMSN LREEFLIRIQ GGYSTMKTSG LIRTRLMSQK VLLVANNVDK
301: LEQLDALADD FNCFGPGSIV IITTHDKQLL VGFGIKVVYE VECLRCFEVR QLFRQSAFRE RDLYVDSEMF STLSVTESSG NSVYDS

Best Arabidopsis Sequence Match ( AT1G17615.1 )
(BLAST)

001: MYSSSSSSSA TPQKFDVFLS FRGKDTRRTF ISFLYKELIE MGIRTFKDDV ELQSGRRIAS DLLAAIENSK IAVVIISKNY SASPWCLQEL VMIMDVEKKG
101: SIIVMPIFYN VEPAHVRRQI EQVAKQFRKH EGRENYETVV SWRQALTNLA SISGHCSRDC EDDSKLLDEI TKRISDMLFS VTPPSESINN QLGFDARMKE
201: LYPLLDLDSN EGVRVVGIWA RGGNGRSALA RYVYQKIFKK FQSHCFLENV KGIPHDCQMS NLRDEFLIRI QGGYSRMKTS GLIKKRLMSQ KVLLVANNVD
301: KLEQLDALAE YFNCFGPGSI VLITTQDKQL LVAFGIKVVY EVECLRCFEV RQLFRQIGFR ERDLNVGSEL SSPISGTESS

Arabidopsis Description

Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:Q4PT31]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.