Factsheet for Bra008060.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48026	Canola	mitochondrion	91.19	89.03
Bra016029.1-P	Field mustard	plastid	68.28	72.77
Bra016027.1-P	Field mustard	plastid	65.2	72.37
Bra003864.1-P	Field mustard	mitochondrion	61.89	65.35
AT1G72890.2	Thale cress	mitochondrion, plastid	67.18	62.63
Bra025962.1-P	Field mustard	cytosol	45.81	53.89
Bra016028.1-P	Field mustard	cytosol	41.85	50.26
Solyc02g032250.1.1	Tomato	cytosol	6.61	42.25
KRH09430	Soybean	cytosol	5.95	39.71
KRH08587	Soybean	cytosol	23.35	38.97
VIT_05s0051g00300.t01	Wine grape	plastid	9.25	37.84
KRG89385	Soybean	cytosol	16.74	35.51
KRH53793	Soybean	cytosol	16.74	34.23
KRH09419	Soybean	cytosol, plasma membrane, plastid	5.29	31.17
KRH64151	Soybean	cytosol	23.57	23.06
Bra003863.1-P	Field mustard	cytosol, plastid	55.73	21.08
Bra016026.1-P	Field mustard	cytosol	45.59	18.14

Protein Annotations

MapMan:26.8.2.1	Gene3D:3.40.50.10140	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra008060	EnsemblPlants:Bra008060.1	EnsemblPlants:Bra008060.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0043531	InterPro:IPR000157	InterPro:IPR035897	UniProt:M4CV15
InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF01582	PRINTS:PR00364	PFscan:PS50104
PANTHER:PTHR43904	SMART:SM00255	SUPFAM:SSF52200	SUPFAM:SSF52540	InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf
UniParc:UPI00025471CC	SEG:seg	:	:	:	:

Description

AT1G72890 (E=2e-151) | disease resistance protein (TIR-NBS class), putative

Coordinates

chrA02:+:12959386..12961071

Molecular Weight (calculated)

52430.4 Da

IEP (calculated)

10.042

GRAVY (calculated)

-0.400

Length

454 amino acids

Sequence
(BLAST)

001: MNRILRKLSC VKTKVKTSLR LFESRSSLSS SSSASFTPKR FDVFLSFRGA DTRRKFVSFL YNDLEAKEIR TFKDDKELES GRPIPPELIQ AIKGSKIAVV
101: VVSATYPASY WCLEELVKIL KYERKGLLKV LPVFYEVDPS HLRWQIGEVA KQFKKHEKRQ SKERVKSWRD ALAYLANLSG ECSKKWDDDS KLVDGITEKI
201: SKMLFSTTPT NGNNLIGIDQ HMDELYPLLD LNSNQGVRVI GIWGRGSNGR SVLARHVYEN ISHNFDAHCL IEDVRRVSRH CRRSHLQEEL LSKMQGEGLG
301: AKTRCLNAIK ARLRNKKILL VANDVDKIKQ LDALAEEFSW FGPGSRIIIT TQDRQLLSSS GVTSVYEVEI LRCYEVRQLF RSEAFRQRDD PRVRQLFRSL
401: AFTQRHEHVG LEEPTYRPMD LPGINFFFTL KYLLALLCDR GQLRERLEAM IYSL

Best Arabidopsis Sequence Match ( AT1G72890.1 )
(BLAST)

001: MNTIFKKLSC FKKKVKSLRI FESRSLSSSS SSSFTPQKFD VFLSFRGKDT RKNFVSFLYK ALVSKGIRTF KDDEELERGR PIPPELRQAI KGSRIAVVVV
101: SVTYPASSWC LEELREILKL EKLGLLTVIP IFYEINPSDV RRQSGVVSKQ FKKHEKRQSR ERVKSWREAL TKLASLSGEC SKNWEDDSKL VDGITEKIST
201: KLFSEKPRND NILIGIDQHM GELYPLFNLN SNEDVQVIGI WGRGSNGRSA LASHVYQNIK HHFEAHCFLE DVRRISLHFR DSHLQDELLS NMQGEGLTTK
301: NCHRCLKTIK ARLRNKKVLL VANDVDKLEQ FDALAEEFSW FGPGSRIIIT TQDRQLLISS VVRSVYEVKL LRCYAVRELF RSNAFKERER DDPVGFDQST
401: YRAMYISGHV FLTLRYIFTL LCDRGQLRER INAIVHSL

Arabidopsis Description

Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:F4IF04]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.