CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89385	Soybean	cytosol	59.01	61.22
KRH09430	Soybean	cytosol	17.57	57.35
KRH08587	Soybean	cytosol	59.46	48.53
Solyc02g032250.1.1	Tomato	cytosol	15.32	47.89
KRH09419	Soybean	cytosol, plasma membrane, plastid	15.77	45.45
VIT_05s0051g00300.t01	Wine grape	plastid	18.47	36.94
AT1G72930.1	Thale cress	cytosol	29.28	36.93
KRH64151	Soybean	cytosol	71.17	34.05
CDX96441	Canola	cytosol	29.28	29.15
CDY59925	Canola	cytosol	31.98	28.86
AT1G72920.1	Thale cress	cytosol	32.88	26.55
CDY11138	Canola	cytosol, plastid	31.08	26.04
CDX72959	Canola	cytosol	36.49	21.26
CDX96440	Canola	cytosol	35.59	21.01
AT1G72900.1	Thale cress	cytosol	33.78	20.66
AT1G72950.1	Thale cress	cytosol	34.68	20.32
CDX96438	Canola	cytosol	33.78	19.84
Bra016028.1-P	Field mustard	cytosol	33.78	19.84
AT1G72910.1	Thale cress	cytosol	33.33	19.47
AT1G72940.1	Thale cress	cytosol	32.43	19.41
AT1G17615.1	Thale cress	cytosol, plastid	32.88	19.21
CDY26232	Canola	cytosol	31.98	18.39
CDY48315	Canola	cytosol	31.98	18.39
Bra025962.1-P	Field mustard	cytosol	31.98	18.39
Bra016029.1-P	Field mustard	plastid	35.14	18.31
CDY11139	Canola	plastid	31.53	17.81
CDY11140	Canola	mitochondrion	33.33	17.13
CDX72958	Canola	plastid	33.33	17.01
Bra003864.1-P	Field mustard	mitochondrion	32.43	16.74
Bra008060.1-P	Field mustard	plastid	34.23	16.74
CDY67955	Canola	mitochondrion	32.43	16.71
CDY48026	Canola	mitochondrion	34.23	16.34
CDX72960	Canola	plastid	31.98	16.17
AT1G72890.2	Thale cress	mitochondrion, plastid	34.68	15.81
CDX96439	Canola	mitochondrion, plastid	25.68	14.07
Bra016027.1-P	Field mustard	plastid	25.68	13.94
CDX72961	Canola	cytosol, plastid	35.59	13.76
CDY16898	Canola	plastid	24.77	10.0
CDX96437	Canola	golgi, mitochondrion	10.36	7.54
Bra016026.1-P	Field mustard	cytosol	36.04	7.01
CDX68251	Canola	cytosol, plastid	31.08	5.8
Bra003863.1-P	Field mustard	cytosol, plastid	30.63	5.67
CDX96442	Canola	cytosol	12.16	3.42

Protein Annotations

MapMan:26.8.2.1	Gene3D:3.40.50.10140	EMBL:ACUP02003486	EnsemblPlantsGene:GLYMA_06G146200	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	InterPro:IPR000157
InterPro:IPR035897	UniProt:K7KV37	EnsemblPlants:KRH53793	ProteinID:KRH53793	ProteinID:KRH53793.1	PFAM:PF01582
PFscan:PS50104	PANTHER:PTHR11017	PANTHER:PTHR11017:SF198	SMART:SM00255	SUPFAM:SSF52200	InterPro:TIR_dom
InterPro:Toll_tir_struct_dom_sf	UniParc:UPI000294FFC7	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:11932059..11932890

Molecular Weight (calculated)

25095.1 Da

IEP (calculated)

6.674

GRAVY (calculated)

-0.086

Length

222 amino acids

Sequence
(BLAST)

001: MALRSGFSSF TYDVFLSFRG SDTRHGFTGN LYKALADRGI YTFIDDEELQ SGKEITPTLL KAIQESRIAI NALSINYASS SFCLDELATI LGCAERKTLL
101: VLPVFSHVRH REDSYGEALV KHEERFEHNT EKLQKWKMTL YQVALLSGYH FKYGDGYEYE FIGRIVERVC IKINLTHLHV AGYLVGLESQ VPRAMKLLDV
201: GSDDGVHMIE IHCIGGIGKT TF

Best Arabidopsis Sequence Match ( AT5G36930.2 )
(BLAST)

0001: MLGMAQGRER IPERWTYDVF VSFRGADVRK NFLSHLYDSL RRCGISTFMD DVELQRGEYI SPELLNAIET SKILIVVLTK DYASSAWCLD ELVHIMKSHK
0101: NNPSHMVFPI FLYVDPSDIR WQQGSYAKSF SKHKNSHPLN KLKDWREALT KVANISGWDI KNRNEAECIA DITREILKRL PCQYLHVPSY AVGLRSRLQH
0201: ISSLLSIGSD GVRVIVIYGM GGIGKTTLAK VAFNEFSHLF EGSSFLENFR EYSKKPEGRT HLQHQLLSDI LRRNDIEFKG LDHAVKERFR SKRVLLVVDD
0301: VDDVHQLNSA AIDRDCFGHG SRIIITTRNM HLLKQLRAEG SYSPKELDGD ESLELFSWHA FRTSEPPKEF LQHSEEVVTY CAGLPLAVEV LGAFLIERSI
0401: REWESTLKLL KRIPNDNIQA KLQISFNALT IEQKDVFLDI ACFFIGVDSY YVACILDGCN LYPDIVLSLL MERCLITISG NNIMMHDLLR DMGRQIVREI
0501: SPKKCGERSR LWSHNDVVGV LKKKSGTNAI EGLSLKADVM DFQYFEVEAF AKMQELRLLE LRYVDLNGSY EHFPKDLRWL CWHGFSLECF PINLSLESLA
0601: ALDLQYSNLK RFWKAQSPPQ PANMVKYLDL SHSVYLRETP DFSYFPNVEK LILINCKSLV LVHKSIGILD KKLVLLNLSS CIELDVLPEE IYKLKSLESL
0701: FLSNCSKLER LDDALGELES LTTLLADFTA LREIPSTINQ LKKLKRLSLN GCKGLLSDDI DNLYSEKSHS VSLLRPVSLS GLTYMRILSL GYCNLSDELI
0801: PEDIGSLSFL RDLDLRGNSF CNLPTDFATL PNLGELLLSD CSKLQSILSL PRSLLFLDVG KCIMLKRTPD ISKCSALFKL QLNDCISLFE IPGIHNHEYL
0901: SFIVLDGCKL ASTDTTINTM LENWLKRNHE CIYIPVDRPN VIPNWVYFEE EKRSFSITVP ETDNSDTVVG FTLWMNFVCP MGYSSIYPRA IIVRNLTRGS
1001: AWIHSLKNSK IRIQMNANLL TNDFHIVTGD EIEVDVDCDD RFTILATGIA LCYKARDSSD FSFGDIKFTY EEDDLGYASN GIYLDCHRSK YGHDSLQAVV
1101: HWKISYPMDG ETSNLFACSF FPGISRYQEN NQPVVDVEES NHRPRRKMRM SLWKILGAIG FLTLVVVLEV YFELLSSIFA NSTTDYIMLP T

Arabidopsis Description

Disease resistance protein (TIR-NBS-LRR class) family [Source:UniProtKB/TrEMBL;Acc:B3H776]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.