Factsheet for Bra016027.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96439	Canola	mitochondrion, plastid	98.78	99.75
Bra016029.1-P	Field mustard	plastid	82.4	79.11
Bra008060.1-P	Field mustard	plastid	72.37	65.2
Bra003864.1-P	Field mustard	mitochondrion	62.35	59.3
AT1G72890.2	Thale cress	mitochondrion, plastid	67.24	56.47
Bra025962.1-P	Field mustard	cytosol	44.99	47.67
Bra016028.1-P	Field mustard	cytosol	41.08	44.44
VIT_05s0051g00300.t01	Wine grape	plastid	9.54	35.14
KRH08587	Soybean	cytosol	22.74	34.19
Solyc02g032250.1.1	Tomato	cytosol	5.62	32.39
KRG89385	Soybean	cytosol	15.89	30.37
KRH09430	Soybean	cytosol	4.89	29.41
KRH53793	Soybean	cytosol	13.94	25.68
KRH09419	Soybean	cytosol, plasma membrane, plastid	4.4	23.38
Bra003863.1-P	Field mustard	cytosol, plastid	56.48	19.25
KRH64151	Soybean	cytosol	21.03	18.53
Bra016026.1-P	Field mustard	cytosol	43.52	15.6

Protein Annotations

Gene3D:3.40.50.10140	Gene3D:3.40.50.300	MapMan:35.1	ProteinID:ACP30628	ProteinID:ACP30628.1	EnsemblPlantsGene:Bra016027
EnsemblPlants:Bra016027.1	EnsemblPlants:Bra016027.1-P	EMBL:FJ842847	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0043531
InterPro:IPR000157	InterPro:IPR035897	UniProt:M4DHQ0	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
PFAM:PF01582	PRINTS:PR00364	PFscan:PS50104	PANTHER:PTHR11017	SMART:SM00255	SUPFAM:SSF52200
SUPFAM:SSF52540	InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf	UniParc:UPI0002541CB2	SEG:seg	:

Description

AT1G72890 (E=2e-120) | disease resistance protein (TIR-NBS class), putative

Coordinates

chrA07:+:19775054..19776579

Molecular Weight (calculated)

47415.5 Da

IEP (calculated)

10.004

GRAVY (calculated)

-0.432

Length

409 amino acids

Sequence
(BLAST)

001: MNRILKKLSC FKTKVKSLRL FESNSSLSSS SSSSFTPQKY NVFLNFRGAD TRKNFVSFLY RDLVAKEIRT FKDDKELERG QLVKILKLEK QGLIKVLPIF
101: YDVDPCDVRR QTGAVKKHFE KHKKRLSREK VKSWRDALNY LAELSGECSQ NWEDDSKLVV EITERITERV SKMLFSVKPR NGNNLIGIDE HMNELYPRLD
201: LSSKEGVRVI GIWGRGSMGR SALARHVYES ISHNFEAHCF LEDVRKISQH CRKSHLQEEL LSMMQGEGLN TKSSHRCLKA IRARLRNKKV LLVANDVDKI
301: EQLESLGEEF SWFGHGSRVV ITTQDRQLLS SWGVKIVYEV EFLKCCEVRK LFRSEAFKQR EVDPVGLEQS TYHPHMNFLG INFILKCLVA LLCDTGQLKE
401: RLSALIYTR

Best Arabidopsis Sequence Match ( AT1G72890.1 )
(BLAST)

001: MNTIFKKLSC FKKKVKSLRI FESRSLSSSS SSSFTPQKFD VFLSFRGKDT RKNFVSFLYK ALVSKGIRTF KDDEELERGR PIPPELRQAI KGSRIAVVVV
101: SVTYPASSWC LEELREILKL EKLGLLTVIP IFYEINPSDV RRQSGVVSKQ FKKHEKRQSR ERVKSWREAL TKLASLSGEC SKNWEDDSKL VDGITEKIST
201: KLFSEKPRND NILIGIDQHM GELYPLFNLN SNEDVQVIGI WGRGSNGRSA LASHVYQNIK HHFEAHCFLE DVRRISLHFR DSHLQDELLS NMQGEGLTTK
301: NCHRCLKTIK ARLRNKKVLL VANDVDKLEQ FDALAEEFSW FGPGSRIIIT TQDRQLLISS VVRSVYEVKL LRCYAVRELF RSNAFKERER DDPVGFDQST
401: YRAMYISGHV FLTLRYIFTL LCDRGQLRER INAIVHSL

Arabidopsis Description

Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:F4IF04]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.