Factsheet for Bra003864.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67955	Canola	mitochondrion	92.56	92.34
Bra016029.1-P	Field mustard	plastid	65.12	65.73
Bra016027.1-P	Field mustard	plastid	59.3	62.35
Bra008060.1-P	Field mustard	plastid	65.35	61.89
AT1G72890.2	Thale cress	mitochondrion, plastid	62.09	54.83
Bra025962.1-P	Field mustard	cytosol	46.28	51.55
Bra016028.1-P	Field mustard	cytosol	41.63	47.35
Solyc02g032250.1.1	Tomato	cytosol	7.44	45.07
KRH09430	Soybean	cytosol	6.74	42.65
VIT_05s0051g00300.t01	Wine grape	plastid	10.47	40.54
KRH09419	Soybean	cytosol, plasma membrane, plastid	6.74	37.66
KRH08587	Soybean	cytosol	23.26	36.76
KRG89385	Soybean	cytosol	18.14	36.45
KRH53793	Soybean	cytosol	16.74	32.43
Bra003863.1-P	Field mustard	cytosol, plastid	64.65	23.17
KRH64151	Soybean	cytosol	23.26	21.55
Bra016026.1-P	Field mustard	cytosol	44.88	16.91

Protein Annotations

MapMan:26.8.2.1	Gene3D:3.40.50.10140	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra003864	EnsemblPlants:Bra003864.1	EnsemblPlants:Bra003864.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0043531	InterPro:IPR000157	InterPro:IPR035897	UniProt:M4CI31
InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF01582	PFscan:PS50104	PANTHER:PTHR11017
SMART:SM00255	SUPFAM:SSF52200	SUPFAM:SSF52540	InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf	UniParc:UPI00025417A2
SEG:seg	:	:	:	:	:

Description

AT1G72890 (E=4e-128) | disease resistance protein (TIR-NBS class), putative

Coordinates

chrA07:-:15438716..15440377

Molecular Weight (calculated)

49119.4 Da

IEP (calculated)

9.483

GRAVY (calculated)

-0.340

Length

430 amino acids

Sequence
(BLAST)

001: MNTVLKKRSC FKTKVKSLRL FESRLSSSFS FPPKKYDVFL SFRGADTRKN FVSFLYKELE TKGIQTFKDD KALVRGRPIA PELVQAIQGT RIAVVVVSPT
101: YSASYWCLEE LVKILKLEKK GLLVVVPIFY EVDPCQVRRQ KGEVAEQFKK HKRRYSRERV RSWRNALTRV TILSGDCSKN CKDDATLVDG ITKRISEILS
201: TETQRNGNNL IDFDKHMKEL YPLLDLDSNE GVQVSGIWGR GSNGISALAR GVYQDILPNF EAHCFLEDLR RISLDCQKSH LQEELLSKME GPCLSTKSSR
301: MCFDAIKARL GNKKVLLVAN DVDKIEKLDA LANEFSWFGP GSRIIIVTQD KQLLSSWGVK SVYEVELLRC CEVGKLWRSE AFKQKQDPES FEGSMNLPGS
401: NLFSSLKYLI NYLSDGDQLR ERLNDIIYSL

Best Arabidopsis Sequence Match ( AT1G72890.1 )
(BLAST)

001: MNTIFKKLSC FKKKVKSLRI FESRSLSSSS SSSFTPQKFD VFLSFRGKDT RKNFVSFLYK ALVSKGIRTF KDDEELERGR PIPPELRQAI KGSRIAVVVV
101: SVTYPASSWC LEELREILKL EKLGLLTVIP IFYEINPSDV RRQSGVVSKQ FKKHEKRQSR ERVKSWREAL TKLASLSGEC SKNWEDDSKL VDGITEKIST
201: KLFSEKPRND NILIGIDQHM GELYPLFNLN SNEDVQVIGI WGRGSNGRSA LASHVYQNIK HHFEAHCFLE DVRRISLHFR DSHLQDELLS NMQGEGLTTK
301: NCHRCLKTIK ARLRNKKVLL VANDVDKLEQ FDALAEEFSW FGPGSRIIIT TQDRQLLISS VVRSVYEVKL LRCYAVRELF RSNAFKERER DDPVGFDQST
401: YRAMYISGHV FLTLRYIFTL LCDRGQLRER INAIVHSL

Arabidopsis Description

Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:F4IF04]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.