Factsheet for Solyc02g032250.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09430	Soybean	cytosol	45.07	47.06
KRH09419	Soybean	cytosol, plasma membrane, plastid	35.21	32.47
VIT_05s0051g00300.t01	Wine grape	plastid	49.3	31.53
AT1G72930.1	Thale cress	cytosol	42.25	17.05
KRH53793	Soybean	cytosol	47.89	15.32
KRG89385	Soybean	cytosol	43.66	14.49
CDX96441	Canola	cytosol	45.07	14.35
CDY59925	Canola	cytosol	46.48	13.41
KRH08587	Soybean	cytosol	49.3	12.87
AT1G72920.1	Thale cress	cytosol	46.48	12.0
CDY11138	Canola	cytosol, plastid	42.25	11.32
AT1G72900.1	Thale cress	cytosol	45.07	8.82
CDX96440	Canola	cytosol	46.48	8.78
Bra016028.1-P	Field mustard	cytosol	46.48	8.73
CDX96438	Canola	cytosol	46.48	8.73
AT1G17615.1	Thale cress	cytosol, plastid	46.48	8.68
CDX72959	Canola	cytosol	46.48	8.66
AT1G72940.1	Thale cress	cytosol	45.07	8.63
AT1G72910.1	Thale cress	cytosol	45.07	8.42
CDY48315	Canola	cytosol	45.07	8.29
CDY26232	Canola	cytosol	45.07	8.29
Bra025962.1-P	Field mustard	cytosol	45.07	8.29
Bra016029.1-P	Field mustard	plastid	47.89	7.98
AT1G72950.1	Thale cress	cytosol	42.25	7.92
CDX72958	Canola	plastid	47.89	7.82
Bra003864.1-P	Field mustard	mitochondrion	45.07	7.44
CDY67955	Canola	mitochondrion	45.07	7.42
CDY11140	Canola	mitochondrion	45.07	7.41
CDY11139	Canola	plastid	40.85	7.38
CDX72960	Canola	plastid	43.66	7.06
AT1G72890.2	Thale cress	mitochondrion, plastid	47.89	6.98
KRH64151	Soybean	cytosol	45.07	6.9
Bra008060.1-P	Field mustard	plastid	42.25	6.61
CDY48026	Canola	mitochondrion	42.25	6.45
CDX96439	Canola	mitochondrion, plastid	32.39	5.68
Bra016027.1-P	Field mustard	plastid	32.39	5.62
CDX72961	Canola	cytosol, plastid	45.07	5.57
Bra016026.1-P	Field mustard	cytosol	45.07	2.8
Bra003863.1-P	Field mustard	cytosol, plastid	39.44	2.33
CDX68251	Canola	cytosol, plastid	38.03	2.27
CDY16898	Canola	plastid	14.08	1.82
CDX96442	Canola	cytosol	14.08	1.27
CDX96437	Canola	golgi, mitochondrion	4.23	0.98

Protein Annotations

EnsemblPlants:Solyc02g032250.1.1	EnsemblPlantsGene:Solyc02g032250.1	Gene3D:3.40.50.10140	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	InterPro:IPR000157	InterPro:IPR035897
InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf	PANTHER:PTHR43911	PANTHER:PTHR43911:SF5	PFAM:PF01582	PFscan:PS50104
SUPFAM:SSF52200	UniParc:UPI0002769195	UniProt:K4B5H1	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr2:-:28051886..28052101

Molecular Weight (calculated)

8384.9 Da

IEP (calculated)

5.079

GRAVY (calculated)

-0.717

Length

71 amino acids

Sequence
(BLAST)

1: MYYDVFMSFR GEDTRKTFTD QLYKALMDEG YQTFRDDNEI ERGEDIKSEL NKAIHSSKSS IFVLSKKLCN V

Best Arabidopsis Sequence Match ( AT1G72890.1 )
(BLAST)

001: MNTIFKKLSC FKKKVKSLRI FESRSLSSSS SSSFTPQKFD VFLSFRGKDT RKNFVSFLYK ALVSKGIRTF KDDEELERGR PIPPELRQAI KGSRIAVVVV
101: SVTYPASSWC LEELREILKL EKLGLLTVIP IFYEINPSDV RRQSGVVSKQ FKKHEKRQSR ERVKSWREAL TKLASLSGEC SKNWEDDSKL VDGITEKIST
201: KLFSEKPRND NILIGIDQHM GELYPLFNLN SNEDVQVIGI WGRGSNGRSA LASHVYQNIK HHFEAHCFLE DVRRISLHFR DSHLQDELLS NMQGEGLTTK
301: NCHRCLKTIK ARLRNKKVLL VANDVDKLEQ FDALAEEFSW FGPGSRIIIT TQDRQLLISS VVRSVYEVKL LRCYAVRELF RSNAFKERER DDPVGFDQST
401: YRAMYISGHV FLTLRYIFTL LCDRGQLRER INAIVHSL

Arabidopsis Description

Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:F4IF04]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.