Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016028.1-P | Field mustard | cytosol | 99.47 | 99.47 |
| CDX72959 | Canola | cytosol | 89.68 | 88.98 |
| CDX96440 | Canola | cytosol | 83.07 | 83.51 |
| AT1G72950.1 | Thale cress | cytosol | 67.46 | 67.28 |
| AT1G72940.1 | Thale cress | cytosol | 63.23 | 64.42 |
| AT1G72930.1 | Thale cress | cytosol | 29.37 | 63.07 |
| AT1G72900.1 | Thale cress | cytosol | 56.61 | 58.95 |
| AT1G72920.1 | Thale cress | cytosol | 42.86 | 58.91 |
| CDY59925 | Canola | cytosol | 37.83 | 58.13 |
| CDX96441 | Canola | cytosol | 34.13 | 57.85 |
| AT1G72910.1 | Thale cress | cytosol | 55.82 | 55.53 |
| CDY48315 | Canola | cytosol | 56.61 | 55.44 |
| CDY26232 | Canola | cytosol | 56.35 | 55.18 |
| CDX72961 | Canola | cytosol, plastid | 78.31 | 51.57 |
| Solyc02g032250.1.1 | Tomato | cytosol | 8.73 | 46.48 |
| CDX72958 | Canola | plastid | 50.53 | 43.91 |
| CDY11138 | Canola | cytosol, plastid | 30.42 | 43.4 |
| CDY11139 | Canola | plastid | 44.71 | 43.0 |
| CDY11140 | Canola | mitochondrion | 47.88 | 41.9 |
| CDY67955 | Canola | mitochondrion | 47.35 | 41.53 |
| CDY48026 | Canola | mitochondrion | 51.06 | 41.51 |
| CDX96439 | Canola | mitochondrion, plastid | 44.44 | 41.48 |
| CDX72960 | Canola | plastid | 48.15 | 41.46 |
| KRH09430 | Soybean | cytosol | 7.41 | 41.18 |
| VIT_05s0051g00300.t01 | Wine grape | plastid | 11.64 | 39.64 |
| KRH08587 | Soybean | cytosol | 26.72 | 37.13 |
| KRH09419 | Soybean | cytosol, plasma membrane, plastid | 7.41 | 36.36 |
| CDX96437 | Canola | golgi, mitochondrion | 28.31 | 35.08 |
| KRH53793 | Soybean | cytosol | 19.84 | 33.78 |
| KRG89385 | Soybean | cytosol | 18.52 | 32.71 |
| KRH64151 | Soybean | cytosol | 25.66 | 20.91 |
| CDX68251 | Canola | cytosol, plastid | 44.97 | 14.29 |
| CDY16898 | Canola | plastid | 17.46 | 12.0 |
| CDX96442 | Canola | cytosol | 14.29 | 6.84 |
Protein Annotations
| MapMan:26.8.2.1 | Gene3D:3.40.50.10140 | Gene3D:3.40.50.300 | GO:A0A078EAL2 | EnsemblPlants:CDX96438 | ProteinID:CDX96438 |
| ProteinID:CDX96438.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00102606001 | InterPro:IPR000157 | InterPro:IPR035897 | InterPro:P-loop_NTPase |
| PFAM:PF01582 | PRINTS:PR00364 | PFscan:PS50104 | PANTHER:PTHR11017 | SMART:SM00255 | SUPFAM:SSF52200 |
| SUPFAM:SSF52540 | InterPro:TIR_dom | InterPro:Toll_tir_struct_dom_sf | UniParc:UPI0004EDF44C | : | : |
Description
BnaA07g30490D
Coordinates
chrLK031894:+:845929..847290
Molecular Weight (calculated)
43156.2 Da
IEP (calculated)
9.260
GRAVY (calculated)
-0.263
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSTPPTIP KYDVFLSFRG LDTRRNFISF LYKELVRRNI RTFKDDKELE SGRKISPELE RAIQESKFAV VVISANYAAS TWCLQELVKI MDFVNKGSLT
101: VIPVFHGVEP CHVRWQMEKF AVQFEEHKSE DREKVLSWGH ALTNLANISG HCSSEWEDDS MMVDEIARRI STWIDTTRKP TRTGSNLVGI DVHMKAVSRL
201: IDLNSKKKSV RVIGIWGRGG NGRSALAEFV YKNICQHFGS HCFLENVKRI SQDRHMSHLR QEVLKRVQVE SNQKVLLVAN EVNKLEHFDA LAEDFSCFGP
301: GSIVIITTQD KQLLVSAGIK LVYEAEPLAF QKVRELFRQL GFRVREGAIE SELCKGTNLA MKWLGCCLPV RSGYRKLS
101: VIPVFHGVEP CHVRWQMEKF AVQFEEHKSE DREKVLSWGH ALTNLANISG HCSSEWEDDS MMVDEIARRI STWIDTTRKP TRTGSNLVGI DVHMKAVSRL
201: IDLNSKKKSV RVIGIWGRGG NGRSALAEFV YKNICQHFGS HCFLENVKRI SQDRHMSHLR QEVLKRVQVE SNQKVLLVAN EVNKLEHFDA LAEDFSCFGP
301: GSIVIITTQD KQLLVSAGIK LVYEAEPLAF QKVRELFRQL GFRVREGAIE SELCKGTNLA MKWLGCCLPV RSGYRKLS
001: MSDSSNTLPK FDVFLSFRGL DTRRSFISFL YKELIRRNIR TFKDDKELKN GRRITPELIR AIEGSRFAVV VVSVNYAASR WCLEELVKIM DFENMGSLKV
101: MPIFYGVDPC HVRRQIGEVA EQFKKHEGRE DHEKVLSWRQ ALTNLASISG DCSWKWEDDS KMVEEITDRI SKELMIDTTR SNGSDLEGID AHMKALHRLL
201: NLNSKKSVRV IGIWARGGNG RSALAKFVYQ NICQHFESHC FLESVKRISQ DRHLSHLHEE FMIRIQGECL SKLRLKNQKV LLVADDVNKL EQLDALAEDF
301: NCFGPGSIVI ITTQDRQLLI SAGIKLVYEV ELLRFQKVRG LFRQLAFKEK DISAAFEVSL YRATNVAMEW LGCICGRSG
101: MPIFYGVDPC HVRRQIGEVA EQFKKHEGRE DHEKVLSWRQ ALTNLASISG DCSWKWEDDS KMVEEITDRI SKELMIDTTR SNGSDLEGID AHMKALHRLL
201: NLNSKKSVRV IGIWARGGNG RSALAKFVYQ NICQHFESHC FLESVKRISQ DRHLSHLHEE FMIRIQGECL SKLRLKNQKV LLVADDVNKL EQLDALAEDF
301: NCFGPGSIVI ITTQDRQLLI SAGIKLVYEV ELLRFQKVRG LFRQLAFKEK DISAAFEVSL YRATNVAMEW LGCICGRSG
Arabidopsis Description
Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:Q9SSN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.