CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008060.1-P	Field mustard	plastid	89.03	91.19
CDX72958	Canola	plastid	68.6	73.33
CDX72960	Canola	plastid	67.31	71.3
CDX96439	Canola	mitochondrion, plastid	60.86	69.88
CDY11139	Canola	plastid	53.55	63.36
CDY11140	Canola	mitochondrion	58.71	63.19
CDY67955	Canola	mitochondrion	57.42	61.95
AT1G72890.2	Thale cress	mitochondrion, plastid	64.73	61.81
CDY11138	Canola	cytosol, plastid	33.76	59.25
CDX96437	Canola	golgi, mitochondrion	38.49	58.69
CDY26232	Canola	cytosol	45.16	54.4
CDY48315	Canola	cytosol	44.95	54.15
CDX96440	Canola	cytosol	43.44	53.72
CDX72959	Canola	cytosol	43.44	53.02
CDX96438	Canola	cytosol	41.51	51.06
CDX96441	Canola	cytosol	23.87	49.78
CDY59925	Canola	cytosol	24.52	46.34
Solyc02g032250.1.1	Tomato	cytosol	6.45	42.25
KRH09430	Soybean	cytosol	5.81	39.71
KRH08587	Soybean	cytosol	23.01	39.34
VIT_05s0051g00300.t01	Wine grape	plastid	9.03	37.84
KRG89385	Soybean	cytosol	16.34	35.51
CDX72961	Canola	cytosol, plastid	43.23	35.02
KRH53793	Soybean	cytosol	16.34	34.23
KRH09419	Soybean	cytosol, plasma membrane, plastid	5.16	31.17
KRH64151	Soybean	cytosol	22.58	22.63
CDX68251	Canola	cytosol, plastid	53.98	21.09
CDY16898	Canola	plastid	18.28	15.45
CDX96442	Canola	cytosol	15.27	8.99

Protein Annotations

MapMan:26.8.2.1	Gene3D:3.40.50.10140	Gene3D:3.40.50.300	GO:A0A078IDP3	UniProt:A0A078IDP3	EnsemblPlants:CDY48026
ProteinID:CDY48026	ProteinID:CDY48026.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0043531	EnsemblPlantsGene:GSBRNA2T00088678001
InterPro:IPR000157	InterPro:IPR035897	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF01582
PRINTS:PR00364	PFscan:PS50104	PANTHER:PTHR11017	SMART:SM00255	SUPFAM:SSF52200	SUPFAM:SSF52540
InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf	UniParc:UPI0004EE31DF	SEG:seg	:	:

Description

BnaA02g16190DBnaA02g16190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDP3]

Coordinates

chrLK032750:+:73906..76887

Molecular Weight (calculated)

53354.1 Da

IEP (calculated)

9.632

GRAVY (calculated)

-0.459

Length

465 amino acids

Sequence
(BLAST)

001: MNRILRKLSC VKTKVKTSLR LFESRSSLSS SSSASFTPKR FDVFLSFRGA DTRRKFVSFL YNDLEAKEIR TFKDDKELES GRPIPPELIQ AIKGSKIAVV
101: VVSATYPASY WCLEELVKIL KYERKGLLKV LPVFYEVDPS HLRWQIGEVA KQFKKHEKRQ SKERVKSWRD ALAYLANLSG ECSKKWDDDS KLVDGITEKI
201: SKMFFSTTPT NGNNLIGIDQ HMDELYPLLD LNSNQGVRVI GIWGRGSNGR SVLARHVYEN ISHNFDAHCL LEDVRRVSRH CRRSHLQEEL LSKMQGEGLG
301: AKTRCLNAIK ARLRNKKILL VANDVDKIKQ LDALAEEFSW FGPGSRIIIT TQDRQLLSSS GVTSVYEVEI LRCYEVRQLF RSEAFRQRDD PKVRQLFRSL
401: AFTQRHEHVG LEEPTYRPMD LPDKSEGCCS VHLIDGDGIY NVSGIDHLIK EVSDHKRYGL QDVPI

Best Arabidopsis Sequence Match ( AT1G72890.1 )
(BLAST)

001: MNTIFKKLSC FKKKVKSLRI FESRSLSSSS SSSFTPQKFD VFLSFRGKDT RKNFVSFLYK ALVSKGIRTF KDDEELERGR PIPPELRQAI KGSRIAVVVV
101: SVTYPASSWC LEELREILKL EKLGLLTVIP IFYEINPSDV RRQSGVVSKQ FKKHEKRQSR ERVKSWREAL TKLASLSGEC SKNWEDDSKL VDGITEKIST
201: KLFSEKPRND NILIGIDQHM GELYPLFNLN SNEDVQVIGI WGRGSNGRSA LASHVYQNIK HHFEAHCFLE DVRRISLHFR DSHLQDELLS NMQGEGLTTK
301: NCHRCLKTIK ARLRNKKVLL VANDVDKLEQ FDALAEEFSW FGPGSRIIIT TQDRQLLISS VVRSVYEVKL LRCYAVRELF RSNAFKERER DDPVGFDQST
401: YRAMYISGHV FLTLRYIFTL LCDRGQLRER INAIVHSL

Arabidopsis Description

Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:F4IF04]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.