CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 2
mitochondrion 3
golgi 3
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	golgi, mitochondrion, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96439	Canola	mitochondrion, plastid	72.13	54.32
CDX72960	Canola	plastid	70.49	48.97
CDX72958	Canola	plastid	69.84	48.97
CDY48026	Canola	mitochondrion	58.69	38.49
CDY11140	Canola	mitochondrion	53.44	37.73
CDY11139	Canola	plastid	47.87	37.15
CDY67955	Canola	mitochondrion	51.8	36.66
AT1G72890.2	Thale cress	mitochondrion, plastid	56.07	35.11
CDY26232	Canola	cytosol	39.67	31.35
CDY48315	Canola	cytosol	39.67	31.35
CDX72959	Canola	cytosol	37.05	29.66
CDX96440	Canola	cytosol	35.74	28.99
CDX96438	Canola	cytosol	35.08	28.31
CDY11138	Canola	cytosol, plastid	18.36	21.13
CDX72961	Canola	cytosol, plastid	36.72	19.51
KRH08587	Soybean	cytosol	15.41	17.28
CDY59925	Canola	cytosol	10.82	13.41
KRG89385	Soybean	cytosol	8.85	12.62
CDX68251	Canola	cytosol, plastid	49.18	12.61
KRH64151	Soybean	cytosol	18.36	12.07
CDX96441	Canola	cytosol	7.87	10.76
KRH53793	Soybean	cytosol	7.54	10.36
CDY16898	Canola	plastid	16.72	9.27
KRH09430	Soybean	cytosol	1.31	5.88
CDX96442	Canola	cytosol	14.75	5.7
KRH09419	Soybean	cytosol, plasma membrane, plastid	1.31	5.19
Solyc02g032250.1.1	Tomato	cytosol	0.98	4.23
VIT_05s0051g00300.t01	Wine grape	plastid	0.98	2.7

Protein Annotations

EnsemblPlants:CDX96437	EnsemblPlantsGene:GSBRNA2T00102605001	Gene3D:3.40.50.300	GO:A0A078E5T3	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	PANTHER:PTHR11017	PFAM:PF00931
PRINTS:PR00364	ProteinID:CDX96437	ProteinID:CDX96437.1	SEG:seg	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI0004EDE039	MapMan:35.1	:	:	:	:

Description

BnaA07g30480D

Coordinates

chrLK031894:+:842025..843453

Molecular Weight (calculated)

35085.0 Da

IEP (calculated)

9.579

GRAVY (calculated)

-0.073

Length

305 amino acids

Sequence
(BLAST)

001: MNRIMKKLSC FKTKVKSLRL LESRSSLSLV NVQRTGKIFL DYSVFTLFLL CFTLFHSVFT LEDDSKLVDG ITERVSKMLF SVKPRNGNNL IGIDEHMNEL
101: YPRLDLSSKE GVRVIGIWGR GSMGRSALAR HVYESISHNF EAHCFLEDVR KISQHCRKSH LQEELLSMMQ GEGLSTKSSH RCLKAIKARL RNKKVLLVAN
201: DVDKIEQLES LGEEFSWFGH GSRVVIATQD RQLLSSWGVK SVYEVELLKC YEVRKLFRSE AFKQREVDPI GLEQCTYHPH MNFLGINFIL KCLVALFLIV
301: VHTIV

Best Arabidopsis Sequence Match ( AT1G17615.1 )
(BLAST)

001: MYSSSSSSSA TPQKFDVFLS FRGKDTRRTF ISFLYKELIE MGIRTFKDDV ELQSGRRIAS DLLAAIENSK IAVVIISKNY SASPWCLQEL VMIMDVEKKG
101: SIIVMPIFYN VEPAHVRRQI EQVAKQFRKH EGRENYETVV SWRQALTNLA SISGHCSRDC EDDSKLLDEI TKRISDMLFS VTPPSESINN QLGFDARMKE
201: LYPLLDLDSN EGVRVVGIWA RGGNGRSALA RYVYQKIFKK FQSHCFLENV KGIPHDCQMS NLRDEFLIRI QGGYSRMKTS GLIKKRLMSQ KVLLVANNVD
301: KLEQLDALAE YFNCFGPGSI VLITTQDKQL LVAFGIKVVY EVECLRCFEV RQLFRQIGFR ERDLNVGSEL SSPISGTESS

Arabidopsis Description

Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:Q4PT31]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.