Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G72930.1 | Thale cress | cytosol | 36.36 | 75.0 |
| AT1G72940.1 | Thale cress | cytosol | 73.83 | 72.24 |
| AT1G72920.1 | Thale cress | cytosol | 52.34 | 69.09 |
| AT1G72950.1 | Thale cress | cytosol | 69.97 | 67.02 |
| AT1G72910.1 | Thale cress | cytosol | 69.7 | 66.58 |
| CDX96440 | Canola | cytosol | 62.81 | 60.64 |
| CDX72959 | Canola | cytosol | 62.53 | 59.58 |
| CDX96438 | Canola | cytosol | 58.95 | 56.61 |
| Bra016028.1-P | Field mustard | cytosol | 58.68 | 56.35 |
| CDX96441 | Canola | cytosol | 33.88 | 55.16 |
| AT1G17615.1 | Thale cress | cytosol, plastid | 56.75 | 54.21 |
| CDY59925 | Canola | cytosol | 36.64 | 54.06 |
| Solyc02g032250.1.1 | Tomato | cytosol | 8.82 | 45.07 |
| AT1G72890.2 | Thale cress | mitochondrion, plastid | 53.72 | 40.04 |
| KRH09430 | Soybean | cytosol | 7.44 | 39.71 |
| VIT_05s0051g00300.t01 | Wine grape | plastid | 12.12 | 39.64 |
| CDX72961 | Canola | cytosol, plastid | 60.61 | 38.33 |
| KRH08587 | Soybean | cytosol | 27.82 | 37.13 |
| KRH09419 | Soybean | cytosol, plasma membrane, plastid | 7.44 | 35.06 |
| KRH53793 | Soybean | cytosol | 20.66 | 33.78 |
| KRG89385 | Soybean | cytosol | 18.73 | 31.78 |
| KRH64151 | Soybean | cytosol | 28.93 | 22.63 |
| Bra016026.1-P | Field mustard | cytosol | 61.98 | 19.72 |
Protein Annotations
| MapMan:26.8.2.1 | Gene3D:3.40.50.10140 | Gene3D:3.40.50.300 | EntrezGene:843621 | ProteinID:AAD55637.1 | ProteinID:AEE35389.1 |
| ArrayExpress:AT1G72900 | EnsemblPlantsGene:AT1G72900 | RefSeq:AT1G72900 | TAIR:AT1G72900 | RefSeq:AT1G72900-TAIR-G | EnsemblPlants:AT1G72900.1 |
| TAIR:AT1G72900.1 | EMBL:AY136432 | Unigene:At.71105 | EMBL:BT000215 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0043531 | InterPro:IPR000157 | InterPro:IPR035897 | InterPro:NB-ARC | RefSeq:NP_177433.1 | InterPro:P-loop_NTPase |
| PFAM:PF00931 | PFAM:PF01582 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001185 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50104 | PANTHER:PTHR11017 | UniProt:Q9SSN6 |
| SMART:SM00255 | SUPFAM:SSF52200 | SUPFAM:SSF52540 | InterPro:TIR_dom | InterPro:Toll_tir_struct_dom_sf | UniParc:UPI00000AC6CD |
| SEG:seg | : | : | : | : | : |
Description
Similar to part of disease resistance protein [Source:UniProtKB/TrEMBL;Acc:Q9SSN6]
Coordinates
chr1:+:27432178..27433782
Molecular Weight (calculated)
41211.6 Da
IEP (calculated)
8.194
GRAVY (calculated)
-0.240
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSATATYNY DVFLSFRGPD TRRKFISFLY KELVGRDIRT FKDDKELENG QMISPELILA IEDSRFAVVV VSVNYAASSW CLDELVKIMD IQKNKGSITV
101: MPIFYGVNPC HLRRQIGDVA EQFKKHEARE KDLEKVLKWR QALAALADIS GDCSGEDDSK LVDVIADKIS KELMIVTRIS NGRNLVGIDK HMNELNRLMD
201: LNSNKGKRMV GIWARGGSCR SALAKYVYQT SCQHFDSHCF LGNVKRICQG NYFESHLHKE FLDNIQGENS SKQSLKKQKV LLVADDVDKL EQLDALAGDF
301: SGFGPGSVVI ITTKDKQLLI SYGIQLVYEA EFLTFQKFCR SFRSLAFKKR DDISAAFEWA LYI
101: MPIFYGVNPC HLRRQIGDVA EQFKKHEARE KDLEKVLKWR QALAALADIS GDCSGEDDSK LVDVIADKIS KELMIVTRIS NGRNLVGIDK HMNELNRLMD
201: LNSNKGKRMV GIWARGGSCR SALAKYVYQT SCQHFDSHCF LGNVKRICQG NYFESHLHKE FLDNIQGENS SKQSLKKQKV LLVADDVDKL EQLDALAGDF
301: SGFGPGSVVI ITTKDKQLLI SYGIQLVYEA EFLTFQKFCR SFRSLAFKKR DDISAAFEWA LYI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.